RNA–Protein interactions for RNA: ENST00000638251.1

RTTN-211, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 4,801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-211ENST00000638251 SNRKQ9NRH2 765 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 HELLSQ9NRZ9 838 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 PDRG1Q9NUG6 133 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 CACNA1FO60840 1977 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 ERICH2A1L162 156 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 RGL2O15211 777 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 HMGB1P09429 215 aaKnown RBP8.25□□□□□ -1.09
RTTN-211ENST00000638251 CSPP1Q1MSJ5 1256 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 LRRC24Q50LG9 513 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 SPTY2D1Q68D10 685 aaPredicted RBP8.25□□□□□ -1.09
RTTN-211ENST00000638251 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
RTTN-211ENST00000638251 TTLL11Q8NHH1 800 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 SNX21Q969T3 373 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 ATP6V1DQ9Y5K8 247 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 SCN11AQ9UI33 1791 aa8.25□□□□□ -1.09
RTTN-211ENST00000638251 SASH1O94885 1247 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 BAG6P46379 1132 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 CPLX2Q6PUV4 134 aaKnown RBP8.24□□□□□ -1.09
RTTN-211ENST00000638251 CAMTA2O94983 1202 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 ANP32BQ92688 251 aaKnown RBP8.24□□□□□ -1.09
RTTN-211ENST00000638251 ABCF2Q9UG63 623 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
RTTN-211ENST00000638251 TICAM2Q86XR7 235 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 NLGN1Q8N2Q7 840 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 ZGPATQ8N5A5 531 aaKnown RBP8.24□□□□□ -1.09
RTTN-211ENST00000638251 FAM184AQ8NB25 1140 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
RTTN-211ENST00000638251 KCNQ4P56696 695 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 HAUS7Q99871 368 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
RTTN-211ENST00000638251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 SGSM2O43147 1006 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 SSFA2P28290 1259 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 ERFEQ4G0M1 354 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 ZNF804AQ7Z570 1209 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 KBTBD3Q8NAB2 608 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 CHAF1AQ13111 956 aaPredicted RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 RPS8P62241 208 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 DENND2AQ9ULE3 1009 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 PDE8BO95263 885 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 TDO2P48775 406 aa8.23□□□□□ -1.09
RTTN-211ENST00000638251 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.23□□□□□ -1.09
RTTN-211ENST00000638251 PUS3Q9BZE2 481 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 DBNLQ9UJU6 430 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 USP42Q9H9J4 1324 aaKnown RBP8.23□□□□□ -1.09
RTTN-211ENST00000638251 NFXL1Q6ZNB6 911 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 PI4K2BQ8TCG2 481 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 ARHGEF1Q92888 912 aaKnown RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 SRP68Q9UHB9 627 aaKnown RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 CCDC171Q6TFL3 1326 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 LRP6O75581 1613 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 CSF1RP07333 972 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 CARMIL3Q8ND23 1372 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 ABCA3Q99758 1704 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 RBM8AQ9Y5S9 174 aaKnown RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 GOLGA6L4A6NEF3 574 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 H3BQV1 296 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 CPLX1O14810 134 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 GSTO1P78417 241 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 IFFO2Q5TF58 517 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 DZIP1Q86YF9 867 aaKnown RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 SH2B1Q9NRF2 756 aaPredicted RBP8.22□□□□□ -1.09
RTTN-211ENST00000638251 PLCH1Q4KWH8 1693 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 KCPQ6ZWJ8 1503 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 BCL9LQ86UU0 1499 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 SLC9C2Q5TAH2 1124 aa8.22□□□□□ -1.09
RTTN-211ENST00000638251 DHX16O60231 1041 aaKnown RBP8.21□□□□□ -1.09
RTTN-211ENST00000638251 LDHCP07864 332 aa8.21□□□□□ -1.09
RTTN-211ENST00000638251 PDE6BP35913 854 aa8.21□□□□□ -1.09
RTTN-211ENST00000638251 TXNRD1Q16881 649 aa8.21□□□□□ -1.09
RTTN-211ENST00000638251 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.09
RTTN-211ENST00000638251 ZNF213O14771 459 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 GNAT2P19087 354 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 TBC1D9BQ66K14 1250 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 NAPBQ9H115 298 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 TLR7Q9NYK1 1049 aaKnown RBP8.21□□□□□ -1.1
RTTN-211ENST00000638251 PDCP20941 246 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 RFX5P48382 616 aaPredicted RBP8.21□□□□□ -1.1
RTTN-211ENST00000638251 CHRNDQ07001 517 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 UBE4AQ14139 1066 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 SKOR2Q2VWA4 1001 aaPredicted RBP8.21□□□□□ -1.1
RTTN-211ENST00000638251 NWD2Q9ULI1 1742 aa8.21□□□□□ -1.1
RTTN-211ENST00000638251 TAF5LO75529 589 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 SERPINB2P05120 415 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 TMC4Q7Z404 712 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 LRP10Q7Z4F1 713 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 SPATA5Q8NB90 893 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 SLC4A9Q96Q91 983 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 TRIM34Q9BYJ4 488 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 ALDH1B1P30837 517 aa8.2□□□□□ -1.1
RTTN-211ENST00000638251 HIBADHP31937 336 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms