RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 PRIM1P49642 420 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 RAB27AP51159 221 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 USP11P51784 963 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 CSE1LP55060 971 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 HNRNPUQ00839 825 aaKnown RBP eCLIP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MECOMQ03112 1051 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 FAM160A1Q05DH4 1040 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 PDE4BQ07343 736 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZBTB17Q13105 803 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 G3BP1Q13283 466 aaKnown RBP eCLIP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 FKBP5Q13451 457 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 SEPT2Q15019 361 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 NFE2L2Q16236 605 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 E2F4Q16254 413 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 DDB1Q16531 1140 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 RRP12Q5JTH9 1297 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 SPDYCQ5MJ68 293 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 AKNAD1Q5T1N1 836 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 AGAP9Q5VTM2 703 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 CAVIN1Q6NZI2 390 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 PPP4R3CPQ6ZMV5 832 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 NYAP1Q6ZVC0 841 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ARMC9Q7Z3E5 817 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 PACS2Q86VP3 889 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 RELL1Q8IUW5 271 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MFN1Q8IWA4 741 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 PARP9Q8IXQ6 854 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 AFAP1Q8N556 730 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 KIAA1958Q8N8K9 716 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 CCDC89Q8N998 374 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZNF397Q8NF99 534 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ANKK1Q8NFD2 765 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 FBXO18Q8NFZ0 1043 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 UHMK1Q8TAS1 419 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 FAM81AQ8TBF8 368 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 GPT2Q8TD30 523 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MAML1Q92585 1016 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 TBC1D5Q92609 795 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 EZH1Q92800 747 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 N4BP2L2Q92802 583 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 LRRC45Q96CN5 670 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 KIF1BPQ96EK5 621 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 DDX11Q96FC9 970 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MRFAP1L1Q96HT8 127 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZNF512BQ96KM6 892 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 TCHPQ9BT92 498 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 STK31Q9BXU1 1019 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ALDH8A1Q9H2A2 487 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 TSPYL2Q9H2G4 693 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MMADHCQ9H3L0 296 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 ANTXR1Q9H6X2 564 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 CASS4Q9NQ75 786 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MKS1Q9NXB0 559 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 PSD3Q9NYI0 1048 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 RGL1Q9NZL6 768 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 TBC1D7Q9P0N9 293 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 TCEAL9Q9UHQ7 104 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 XPO7Q9UIA9 1087 aaKnown RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 CFAP45Q9UL16 551 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 MYO6Q9UM54 1294 aa2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 U3KPZ7 1027 aaPredicted RBP2.96□□□□□ -1.94
SYNGAP1-221ENST00000637490 RSF1Q96T23 1441 aaPredicted RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 TLDC2A0PJX2 215 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 GOLGA6L9A6NEM1 432 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 TMEM232C9JQI7 657 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 SGTAO43765 313 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 CLASP2O75122 1294 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 TBCAO75347 108 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 RPS6KA5O75582 802 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 PPP1R15AO75807 674 aaPredicted RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 FOSP01100 380 aaPredicted RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 VIL1P09327 827 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 PYGBP11216 843 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 MYCLP1P12525 358 aaPredicted RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 IL4RP24394 825 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 PSMA3P25788 255 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 INPP5BP32019 993 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 PAPOLAP51003 745 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 HDAC4P56524 1084 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 TBX4P57082 545 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 SLC8A3P57103 927 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 CORO7P57737 925 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 ADCY1Q08828 1119 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 PABPC4Q13310 644 aaKnown RBP eCLIP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 MPP3Q13368 585 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 LAMB3Q13751 1172 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 SAFB2Q14151 953 aaKnown RBP eCLIP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 DHX8Q14562 1220 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 SLMAPQ14BN4 828 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 SUZ12Q15022 739 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 ARHGEF6Q15052 776 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 RCN1Q15293 331 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 TAF11Q15544 211 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 HNRNPUL2Q1KMD3 747 aaKnown RBP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 GNPTABQ3T906 1256 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 BOLA3Q53S33 107 aa2.95□□□□□ -1.94
SYNGAP1-221ENST00000637490 NAALADL2Q58DX5 795 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms