RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 ERC2O15083 957 aa25.78■■□□□ 1.72
CLN8-213ENST00000637156 MMP10P09238 476 aa25.78■■□□□ 1.72
CLN8-213ENST00000637156 ST5P78524 1137 aa25.78■■□□□ 1.72
CLN8-213ENST00000637156 ANKRD18AQ8IVF6 992 aa25.78■■□□□ 1.72
CLN8-213ENST00000637156 TBC1D9Q6ZT07 1266 aa25.77■■□□□ 1.72
CLN8-213ENST00000637156 HELBQ8NG08 1087 aaPredicted RBP25.77■■□□□ 1.72
CLN8-213ENST00000637156 COL4A1P02462 1669 aa25.77■■□□□ 1.72
CLN8-213ENST00000637156 RIC1Q4ADV7 1423 aa25.77■■□□□ 1.72
CLN8-213ENST00000637156 TRIM6-TRIM34B2RNG4 842 aa25.77■■□□□ 1.72
CLN8-213ENST00000637156 MAP4K4O95819 1239 aaPredicted RBP25.77■■□□□ 1.72
CLN8-213ENST00000637156 RPS8P62241 208 aaKnown RBP25.77■■□□□ 1.72
CLN8-213ENST00000637156 BSDC1Q9NW68 430 aaPredicted RBP25.77■■□□□ 1.72
CLN8-213ENST00000637156 RILPL2Q969X0 211 aa25.76■■□□□ 1.71
CLN8-213ENST00000637156 DDX46Q7L014 1031 aaKnown RBP25.75■■□□□ 1.71
CLN8-213ENST00000637156 CDC45O75419 566 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 TAF5LO75529 589 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 ATP5JP18859 108 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 CRY2Q49AN0 593 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 BOLA2Q9H3K6 86 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 KLRG2A4D1S0 409 aaPredicted RBP25.74■■□□□ 1.71
CLN8-213ENST00000637156 XAGE2Q96GT9 111 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 PARP3Q9Y6F1 533 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 ZNF609O15014 1411 aa25.74■■□□□ 1.71
CLN8-213ENST00000637156 ADORA1P30542 326 aa25.73■■□□□ 1.71
CLN8-213ENST00000637156 CHRNDQ07001 517 aa25.73■■□□□ 1.71
CLN8-213ENST00000637156 ATP2B3Q16720 1220 aa25.73■■□□□ 1.71
CLN8-213ENST00000637156 SNAP23O00161 211 aa25.72■■□□□ 1.71
CLN8-213ENST00000637156 FGFR2P21802 821 aa25.72■■□□□ 1.71
CLN8-213ENST00000637156 MINPP1Q9UNW1 487 aa25.72■■□□□ 1.71
CLN8-213ENST00000637156 LRP5O75197 1615 aa25.72■■□□□ 1.71
CLN8-213ENST00000637156 UPF1Q92900 1129 aaKnown RBP eCLIP25.72■■□□□ 1.71
CLN8-213ENST00000637156 BRIP1Q9BX63 1249 aa25.71■■□□□ 1.71
CLN8-213ENST00000637156 TNRC6CQ9HCJ0 1690 aaKnown RBP25.71■■□□□ 1.71
CLN8-213ENST00000637156 TAF1P21675 1872 aa25.7■■□□□ 1.7
CLN8-213ENST00000637156 PUM3Q15397 648 aaKnown RBP25.7■■□□□ 1.7
CLN8-213ENST00000637156 LPIN2Q92539 896 aa25.7■■□□□ 1.7
CLN8-213ENST00000637156 CNTROBQ8N137 903 aa25.69■■□□□ 1.7
CLN8-213ENST00000637156 GRAPQ13588 217 aa25.68■■□□□ 1.7
CLN8-213ENST00000637156 GRAPLQ8TC17 118 aaPredicted RBP25.68■■□□□ 1.7
CLN8-213ENST00000637156 WTIPA6NIX2 430 aaPredicted RBP25.68■■□□□ 1.7
CLN8-213ENST00000637156 RPGRQ92834 1020 aaKnown RBP25.68■■□□□ 1.7
CLN8-213ENST00000637156 NDUFB9Q9Y6M9 179 aa25.68■■□□□ 1.7
CLN8-213ENST00000637156 CHMLP26374 656 aa25.67■■□□□ 1.7
CLN8-213ENST00000637156 HOXA10P31260 410 aaPredicted RBP25.67■■□□□ 1.7
CLN8-213ENST00000637156 CCDC158Q5M9N0 1113 aa25.67■■□□□ 1.7
CLN8-213ENST00000637156 GORABQ5T7V8 394 aa25.67■■□□□ 1.7
CLN8-213ENST00000637156 EVI5LQ96CN4 794 aa25.67■■□□□ 1.7
CLN8-213ENST00000637156 HAUS7Q99871 368 aa25.67■■□□□ 1.7
CLN8-213ENST00000637156 EDC3Q96F86 508 aaKnown RBP25.66■■□□□ 1.7
CLN8-213ENST00000637156 CASZ1Q86V15 1759 aa25.66■■□□□ 1.7
CLN8-213ENST00000637156 MFAP1P55081 439 aaKnown RBP25.66■■□□□ 1.7
CLN8-213ENST00000637156 RBM17Q96I25 401 aaKnown RBP25.66■■□□□ 1.7
CLN8-213ENST00000637156 QSER1Q2KHR3 1735 aa25.65■■□□□ 1.7
CLN8-213ENST00000637156 NRXN2Q9P2S2 1712 aa25.64■■□□□ 1.7
CLN8-213ENST00000637156 IFIT1P09914 478 aaKnown RBP25.64■■□□□ 1.69
CLN8-213ENST00000637156 SRGNP10124 158 aa25.64■■□□□ 1.69
CLN8-213ENST00000637156 CASC1Q6TDU7 716 aa25.64■■□□□ 1.69
CLN8-213ENST00000637156 SLC16A10Q8TF71 515 aa25.64■■□□□ 1.69
CLN8-213ENST00000637156 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.64■■□□□ 1.69
CLN8-213ENST00000637156 SLC5A1P13866 664 aa25.63■■□□□ 1.69
CLN8-213ENST00000637156 TTC39AQ5SRH9 613 aa25.63■■□□□ 1.69
CLN8-213ENST00000637156 SLC51AQ86UW1 340 aa25.63■■□□□ 1.69
CLN8-213ENST00000637156 CRAMP1Q96RY5 1269 aa25.63■■□□□ 1.69
CLN8-213ENST00000637156 DNAJC2Q99543 621 aaKnown RBP25.63■■□□□ 1.69
CLN8-213ENST00000637156 PDE6BP35913 854 aa25.62■■□□□ 1.69
CLN8-213ENST00000637156 CCDC102BQ68D86 513 aa25.62■■□□□ 1.69
CLN8-213ENST00000637156 BBOX1O75936 387 aa25.62■■□□□ 1.69
CLN8-213ENST00000637156 UBE4AQ14139 1066 aa25.62■■□□□ 1.69
CLN8-213ENST00000637156 SCARF1Q14162 830 aa25.62■■□□□ 1.69
CLN8-213ENST00000637156 PHKA1P46020 1223 aa25.61■■□□□ 1.69
CLN8-213ENST00000637156 ZNF512BQ96KM6 892 aaPredicted RBP25.61■■□□□ 1.69
CLN8-213ENST00000637156 ANKRD2Q9GZV1 360 aa25.61■■□□□ 1.69
CLN8-213ENST00000637156 SPEF2Q9C093 1822 aa25.6■■□□□ 1.69
CLN8-213ENST00000637156 UPF2Q9HAU5 1272 aaKnown RBP25.6■■□□□ 1.69
CLN8-213ENST00000637156 BCAMP50895 628 aa25.59■■□□□ 1.69
CLN8-213ENST00000637156 ESYT1Q9BSJ8 1104 aa25.59■■□□□ 1.69
CLN8-213ENST00000637156 IL25Q9H293 177 aa25.59■■□□□ 1.69
CLN8-213ENST00000637156 SNRKQ9NRH2 765 aa25.59■■□□□ 1.69
CLN8-213ENST00000637156 PAG1Q9NWQ8 432 aa25.59■■□□□ 1.69
CLN8-213ENST00000637156 NPR1P16066 1061 aa25.58■■□□□ 1.69
CLN8-213ENST00000637156 MCAMP43121 646 aa25.58■■□□□ 1.69
CLN8-213ENST00000637156 FKBP4Q02790 459 aaKnown RBP eCLIP25.58■■□□□ 1.69
CLN8-213ENST00000637156 GOLIM4O00461 696 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 PI16Q6UXB8 463 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 FSD1Q9BTV5 496 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 ANTXR1Q9H6X2 564 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 ANKRD31Q8N7Z5 1873 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 ARID4AP29374 1257 aaPredicted RBP25.57■■□□□ 1.68
CLN8-213ENST00000637156 TBC1D32Q96NH3 1257 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 C22orf23Q9BZE7 217 aa25.57■■□□□ 1.68
CLN8-213ENST00000637156 CWC27Q6UX04 472 aaKnown RBP25.56■■□□□ 1.68
CLN8-213ENST00000637156 MASTLQ96GX5 879 aa25.56■■□□□ 1.68
CLN8-213ENST00000637156 ZAP70P43403 619 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 KBTBD3Q8NAB2 608 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 ANKIB1Q9P2G1 1089 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 UQCRFS1P1P0C7P4 283 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 ALDH1B1P30837 517 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 GYG1P46976 350 aa25.55■■□□□ 1.68
CLN8-213ENST00000637156 R3HDM1Q15032 1099 aaKnown RBP25.55■■□□□ 1.68
CLN8-213ENST00000637156 FAM84BQ96KN1 310 aaPredicted RBP25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms