RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PI4KAP2A4QPH2 592 aa18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 PI4KAP1Q8N8J0 262 aa18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 ERBB3P21860 1342 aa18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 NRDCO43847 1150 aa18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 CCAR1Q8IX12 1150 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 DHX40Q8IX18 779 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 PHF8Q9UPP1 1060 aa18.21■□□□□ 0.51
CACNA1A-235ENST00000637004 HOXB7P09629 217 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 CYP2C19P33261 490 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 ZBTB22O15209 634 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 RCOR1Q9UKL0 485 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 ADCY9O60503 1353 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 MST1RQ04912 1400 aa18.2■□□□□ 0.5
CACNA1A-235ENST00000637004 PSDA5PKW4 1024 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 CCDC150Q8NCX0 1101 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 TSPYL1Q9H0U9 437 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 JAK2O60674 1132 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 KCNJ6P48051 423 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 PSME1Q06323 249 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 ERCC6LQ2NKX8 1250 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 FSD1Q9BTV5 496 aa18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 ARGLU1Q9NWB6 273 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-235ENST00000637004 ATL3Q6DD88 541 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 A0A0D9SFI3 127 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 TULP2O00295 520 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 NPHP1O15259 732 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 ST7Q9NRC1 585 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 FMN2Q9NZ56 1722 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 MED23Q9ULK4 1368 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 FAM160A1Q05DH4 1040 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 TEX35Q5T0J7 233 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 FHOD1Q9Y613 1164 aa18.18■□□□□ 0.5
CACNA1A-235ENST00000637004 VGLL3A8MV65 326 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 AOPEPQ8N6M6 819 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 C9orf78Q9NZ63 289 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 CLCN6P51797 869 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 E4F1Q66K89 784 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 PPP1R13BQ96KQ4 1090 aa18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 LLPHQ9BRT6 129 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.17■□□□□ 0.5
CACNA1A-235ENST00000637004 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 HSPA1LP34931 641 aa18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 CEBPZQ03701 1054 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 ZNF396Q96N95 335 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 CCP110O43303 1012 aa18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 PNMA6AP0CW24 399 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 HSP90B1P14625 803 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 SYT10Q6XYQ8 523 aa18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 NEK1Q96PY6 1258 aa18.16■□□□□ 0.5
CACNA1A-235ENST00000637004 JCADQ9P266 1359 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 SFPQP23246 707 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 ADD1P35611 737 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 ARHGAP29Q52LW3 1261 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 PA2G4Q9UQ80 394 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 TAF6LQ9Y6J9 622 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 TPM4P67936 248 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 G3BP1Q13283 466 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 TMCO3Q6UWJ1 677 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 ENGASEQ8NFI3 743 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 GOLPH3LQ9H4A5 285 aa18.15■□□□□ 0.5
CACNA1A-235ENST00000637004 EIF4A1P60842 406 aaKnown RBP18.14■□□□□ 0.5
CACNA1A-235ENST00000637004 ZRSR1Q15695 479 aaKnown RBP18.14■□□□□ 0.5
CACNA1A-235ENST00000637004 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.5
CACNA1A-235ENST00000637004 NBPF11Q86T75 865 aa18.14■□□□□ 0.5
CACNA1A-235ENST00000637004 TOPAZ1Q8N9V7 1692 aa18.14■□□□□ 0.49
CACNA1A-235ENST00000637004 UBXN4Q92575 508 aa18.14■□□□□ 0.49
CACNA1A-235ENST00000637004 EAF2Q96CJ1 260 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-235ENST00000637004 TAF5LO75529 589 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 SMARCC2Q8TAQ2 1214 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 CABLES1Q8TDN4 633 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 SRRTQ9BXP5 876 aaKnown RBP18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 KRT28Q7Z3Y7 464 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 FSIP1Q8NA03 581 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 BOLA2Q9H3K6 86 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 TPM1P09493 284 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 Q6ZUG5 572 aa18.13■□□□□ 0.49
CACNA1A-235ENST00000637004 ATP8B1O43520 1251 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 ME1P48163 572 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 HNRNPH2P55795 449 aaKnown RBP18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 BPIFA3Q9BQP9 254 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 SDF4Q9BRK5 362 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 CCDC8Q9H0W5 538 aaPredicted RBP18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 ZRANB2O95218 330 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 SMC2O95347 1197 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 PLA2G4AP47712 749 aa18.12■□□□□ 0.49
CACNA1A-235ENST00000637004 ETF1P62495 437 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms