RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 TFCP2Q12800 502 aa25.39■■□□□ 1.66
CLN5-215ENST00000636767 SMARCC2Q8TAQ2 1214 aa25.39■■□□□ 1.66
CLN5-215ENST00000636767 METTL22Q9BUU2 404 aaPredicted RBP25.39■■□□□ 1.66
CLN5-215ENST00000636767 CFAP45Q9UL16 551 aa25.39■■□□□ 1.66
CLN5-215ENST00000636767 SMTNL1A8MU46 457 aa25.39■■□□□ 1.65
CLN5-215ENST00000636767 SLC39A6Q13433 755 aa25.39■■□□□ 1.65
CLN5-215ENST00000636767 IQCB1Q15051 598 aa25.39■■□□□ 1.65
CLN5-215ENST00000636767 ADD1P35611 737 aaKnown RBP25.38■■□□□ 1.65
CLN5-215ENST00000636767 PTPN12Q05209 780 aaKnown RBP25.38■■□□□ 1.65
CLN5-215ENST00000636767 NCBP1Q09161 790 aaKnown RBP25.38■■□□□ 1.65
CLN5-215ENST00000636767 LRRC2Q9BYS8 371 aa25.38■■□□□ 1.65
CLN5-215ENST00000636767 TNNT1P13805 278 aa25.38■■□□□ 1.65
CLN5-215ENST00000636767 ZNF790Q6PG37 636 aa25.38■■□□□ 1.65
CLN5-215ENST00000636767 C11orf57Q6ZUT1 292 aaPredicted RBP25.38■■□□□ 1.65
CLN5-215ENST00000636767 LAMA4Q16363 1823 aa25.37■■□□□ 1.65
CLN5-215ENST00000636767 COPS6Q7L5N1 327 aa25.37■■□□□ 1.65
CLN5-215ENST00000636767 DNAJC2Q99543 621 aaKnown RBP25.37■■□□□ 1.65
CLN5-215ENST00000636767 U2AF2P26368 475 aaKnown RBP eCLIP25.37■■□□□ 1.65
CLN5-215ENST00000636767 CEBPZQ03701 1054 aaKnown RBP25.37■■□□□ 1.65
CLN5-215ENST00000636767 SARM1Q6SZW1 724 aa25.37■■□□□ 1.65
CLN5-215ENST00000636767 STOX1Q6ZVD7 989 aa25.37■■□□□ 1.65
CLN5-215ENST00000636767 MCMDC2Q4G0Z9 681 aa25.36■■□□□ 1.65
CLN5-215ENST00000636767 SPDYE4A6NLX3 237 aa25.36■■□□□ 1.65
CLN5-215ENST00000636767 PFKFB2O60825 505 aa25.36■■□□□ 1.65
CLN5-215ENST00000636767 NSUN7Q8NE18 718 aaKnown RBP25.36■■□□□ 1.65
CLN5-215ENST00000636767 DBNDD2Q9BQY9 259 aa25.36■■□□□ 1.65
CLN5-215ENST00000636767 LLPHQ9BRT6 129 aaKnown RBP25.36■■□□□ 1.65
CLN5-215ENST00000636767 AXIN2Q9Y2T1 843 aa25.36■■□□□ 1.65
CLN5-215ENST00000636767 HAUS7Q99871 368 aa25.35■■□□□ 1.65
CLN5-215ENST00000636767 FTOQ9C0B1 505 aaKnown RBP eCLIP25.35■■□□□ 1.65
CLN5-215ENST00000636767 SYCP1Q15431 976 aa25.34■■□□□ 1.65
CLN5-215ENST00000636767 GOLPH3LQ9H4A5 285 aa25.34■■□□□ 1.65
CLN5-215ENST00000636767 GOLGA6L19H0YKK7 550 aa25.34■■□□□ 1.65
CLN5-215ENST00000636767 STX1AQ16623 288 aa25.34■■□□□ 1.65
CLN5-215ENST00000636767 NAA16Q6N069 864 aaPredicted RBP25.34■■□□□ 1.65
CLN5-215ENST00000636767 RCOR1Q9UKL0 485 aa25.34■■□□□ 1.65
CLN5-215ENST00000636767 AFDNP55196 1824 aaKnown RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 DDX46Q7L014 1031 aaKnown RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 CCAR1Q8IX12 1150 aaKnown RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 KDM6AO15550 1401 aaPredicted RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 SCN11AQ9UI33 1791 aa25.33■■□□□ 1.65
CLN5-215ENST00000636767 CTAGE5O15320 804 aa25.33■■□□□ 1.65
CLN5-215ENST00000636767 CTDNEP1O95476 244 aa25.33■■□□□ 1.65
CLN5-215ENST00000636767 FOSBP53539 338 aa25.33■■□□□ 1.65
CLN5-215ENST00000636767 TPD52L1Q16890 204 aaPredicted RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 RABL6Q3YEC7 729 aaPredicted RBP25.33■■□□□ 1.65
CLN5-215ENST00000636767 MRFAP1L1Q96HT8 127 aa25.33■■□□□ 1.65
CLN5-215ENST00000636767 FGD1P98174 961 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 LRP10Q7Z4F1 713 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 LRRC8AQ8IWT6 810 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 PAXBP1Q9Y5B6 917 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 SH3TC1Q8TE82 1336 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 SLC52A2Q9HAB3 445 aa25.32■■□□□ 1.64
CLN5-215ENST00000636767 PTPDC1A2A3K4 754 aa25.31■■□□□ 1.64
CLN5-215ENST00000636767 SNW1Q13573 536 aaKnown RBP25.31■■□□□ 1.64
CLN5-215ENST00000636767 ANKRD13DQ6ZTN6 518 aa25.31■■□□□ 1.64
CLN5-215ENST00000636767 UBE3BQ7Z3V4 1068 aa25.31■■□□□ 1.64
CLN5-215ENST00000636767 ZHX1Q9UKY1 873 aaPredicted RBP25.31■■□□□ 1.64
CLN5-215ENST00000636767 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
CLN5-215ENST00000636767 ARID5BQ14865 1188 aa25.31■■□□□ 1.64
CLN5-215ENST00000636767 HMGB1P09429 215 aaKnown RBP25.3■■□□□ 1.64
CLN5-215ENST00000636767 APOBRQ0VD83 1088 aa25.3■■□□□ 1.64
CLN5-215ENST00000636767 DHX32Q7L7V1 743 aaKnown RBP25.3■■□□□ 1.64
CLN5-215ENST00000636767 KBTBD3Q8NAB2 608 aa25.3■■□□□ 1.64
CLN5-215ENST00000636767 USP28Q96RU2 1077 aa25.3■■□□□ 1.64
CLN5-215ENST00000636767 CCDC112Q8NEF3 446 aa25.3■■□□□ 1.64
CLN5-215ENST00000636767 GTPBP4Q9BZE4 634 aaKnown RBP25.3■■□□□ 1.64
CLN5-215ENST00000636767 ZNF496Q96IT1 587 aaPredicted RBP25.29■■□□□ 1.64
CLN5-215ENST00000636767 PIP4K2AP48426 406 aaPredicted RBP25.29■■□□□ 1.64
CLN5-215ENST00000636767 RBM6P78332 1123 aaKnown RBP25.29■■□□□ 1.64
CLN5-215ENST00000636767 LMOD2Q6P5Q4 547 aa25.29■■□□□ 1.64
CLN5-215ENST00000636767 CCDC73Q6ZRK6 1079 aa25.29■■□□□ 1.64
CLN5-215ENST00000636767 DHX40Q8IX18 779 aaKnown RBP25.29■■□□□ 1.64
CLN5-215ENST00000636767 ENGASEQ8NFI3 743 aa25.29■■□□□ 1.64
CLN5-215ENST00000636767 ORAI2Q96SN7 254 aa25.29■■□□□ 1.64
CLN5-215ENST00000636767 PALLDQ8WX93 1383 aa25.28■■□□□ 1.64
CLN5-215ENST00000636767 SALL1Q9NSC2 1324 aa25.28■■□□□ 1.64
CLN5-215ENST00000636767 ARFGEF2Q9Y6D5 1785 aa25.28■■□□□ 1.64
CLN5-215ENST00000636767 A0A087WWV3 80 aa25.28■■□□□ 1.64
CLN5-215ENST00000636767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.28■■□□□ 1.64
CLN5-215ENST00000636767 AGXT2Q9BYV1 514 aa25.28■■□□□ 1.64
CLN5-215ENST00000636767 USP27XA6NNY8 438 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 NEMFO60524 1076 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 NAA30Q147X3 362 aaPredicted RBP25.27■■□□□ 1.64
CLN5-215ENST00000636767 CEP135Q66GS9 1140 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 NFATC2IPQ8NCF5 419 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 FEZ1Q99689 392 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 EXOSC10Q01780 885 aaKnown RBP25.27■■□□□ 1.64
CLN5-215ENST00000636767 SLFNL1Q499Z3 407 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 ERBB3P21860 1342 aa25.27■■□□□ 1.64
CLN5-215ENST00000636767 KINO60870 393 aaKnown RBP25.26■■□□□ 1.63
CLN5-215ENST00000636767 CCT2P78371 535 aaKnown RBP25.26■■□□□ 1.63
CLN5-215ENST00000636767 FAM160A1Q05DH4 1040 aa25.26■■□□□ 1.63
CLN5-215ENST00000636767 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
CLN5-215ENST00000636767 BECN2A8MW95 431 aa25.26■■□□□ 1.63
CLN5-215ENST00000636767 ZNF396Q96N95 335 aaPredicted RBP25.26■■□□□ 1.63
CLN5-215ENST00000636767 NCOA5Q9HCD5 579 aaKnown RBP25.26■■□□□ 1.63
CLN5-215ENST00000636767 CCDC9Q9Y3X0 531 aaKnown RBP25.26■■□□□ 1.63
CLN5-215ENST00000636767 ATL3Q6DD88 541 aa25.25■■□□□ 1.63
CLN5-215ENST00000636767 ILDR1Q86SU0 546 aaPredicted RBP25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms