RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 PRDM4Q9UKN5 801 aa6.35□□□□□ -1.39
SCN2A-212ENST00000636662 PRIM1P49642 420 aaKnown RBP6.34□□□□□ -1.39
SCN2A-212ENST00000636662 SEPT2Q15019 361 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 VPS37DQ86XT2 251 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 CCDC57Q2TAC2 916 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 ARHGEF2Q92974 986 aaKnown RBP6.34□□□□□ -1.39
SCN2A-212ENST00000636662 ARAP1Q96P48 1450 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 CECR2Q9BXF3 1484 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 KIAA1107Q9UPP5 1409 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 STK38Q15208 465 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 HSP90AA5PQ58FG0 334 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCN2A-212ENST00000636662 ATP6V1E1P36543 226 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 IRX4P78413 519 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 SLC9A5Q14940 896 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 IFI16Q16666 785 aaKnown RBP6.34□□□□□ -1.39
SCN2A-212ENST00000636662 SPDL1Q96EA4 605 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 KIF14Q15058 1648 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 PPFIA4O75335 1185 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 CHUKO15111 745 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 SSFA2P28290 1259 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 ME1P48163 572 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 RASSF2P50749 326 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 FCHSD1Q86WN1 690 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 CEP131Q9UPN4 1083 aa6.34□□□□□ -1.39
SCN2A-212ENST00000636662 VAV2P52735 878 aa6.34□□□□□ -1.4
SCN2A-212ENST00000636662 CLUL1Q15846 466 aa6.34□□□□□ -1.4
SCN2A-212ENST00000636662 CCDC125Q86Z20 511 aa6.34□□□□□ -1.4
SCN2A-212ENST00000636662 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.4
SCN2A-212ENST00000636662 PANK1Q8TE04 598 aa6.34□□□□□ -1.4
SCN2A-212ENST00000636662 RAB3IPQ96QF0 476 aaPredicted RBP6.34□□□□□ -1.4
SCN2A-212ENST00000636662 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.34□□□□□ -1.4
SCN2A-212ENST00000636662 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.34□□□□□ -1.4
SCN2A-212ENST00000636662 RPRD2Q5VT52 1461 aaKnown RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 ZSCAN20P17040 1043 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 DRP2Q13474 957 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 CCDC129Q6ZRS4 1044 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 LZICQ8WZA0 190 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 TSGA10Q9BZW7 698 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 PSD3Q9NYI0 1048 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 HNRNPMP52272 730 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 SNCBQ16143 134 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 TRIM60Q495X7 471 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 PALM3A6NDB9 673 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 CCDC159P0C7I6 412 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 PHLDB2Q86SQ0 1253 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 EIF2AQ9BY44 585 aaKnown RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 CXorf56Q9H5V9 222 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 DDX21Q9NR30 783 aaKnown RBP eCLIP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 UBAP1Q9NZ09 502 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 ANKFY1Q9P2R3 1169 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 SUFUQ9UMX1 484 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 LRRD1A4D1F6 860 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 FGFR1OPO95684 399 aaKnown RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 IFIT2P09913 472 aaKnown RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 ZFXP17010 805 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 GKAP1Q5VSY0 366 aaPredicted RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 RINLQ6ZS11 566 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 KDM2BQ8NHM5 1336 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 MAK16Q9BXY0 300 aaKnown RBP6.33□□□□□ -1.4
SCN2A-212ENST00000636662 PFDN4Q9NQP4 134 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 SLC4A8Q2Y0W8 1093 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 SAAL1Q96ER3 474 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 MYO1CO00159 1063 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 ATP5DP30049 168 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 NPHP3Q7Z494 1330 aa6.33□□□□□ -1.4
SCN2A-212ENST00000636662 YEATS4O95619 227 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 PRPHP41219 470 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 CCT4P50991 539 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 RWDD2BP57060 319 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 STK3Q13188 491 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 RNF10Q8N5U6 811 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 TBC1D31Q96DN5 1066 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 CHCHD3Q9NX63 227 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 DAAM1Q9Y4D1 1078 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 IL16Q14005 1332 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 GOLGA8KD6RF30 607 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 APOEP02649 317 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 ATP2A2P16615 1042 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 NUCB1Q02818 461 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 VPS52Q8N1B4 723 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 RABGGTAQ92696 567 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 INTS8Q75QN2 995 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 ARHGAP24Q8N264 748 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 SAMD15Q9P1V8 674 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 ARHGEF12Q9NZN5 1544 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 HNRNPCL2B2RXH8 293 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 HNRNPCL1O60812 293 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 PCYT1AP49585 367 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 SPAG1Q07617 926 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 SART3Q15020 963 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 CCDC186Q7Z3E2 898 aa6.32□□□□□ -1.4
SCN2A-212ENST00000636662 OAS2P29728 719 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 TBC1D10BQ4KMP7 808 aaPredicted RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 NBPF10Q6P3W6 841 aaKnown RBP6.32□□□□□ -1.4
SCN2A-212ENST00000636662 RUFY4Q6ZNE9 571 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms