RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 IVNS1ABPQ9Y6Y0 642 aa4.74□□□□□ -1.65
PSPC1-208ENST00000635562 MICAL2O94851 1124 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 HOXD8P13378 290 aaPredicted RBP4.73□□□□□ -1.65
PSPC1-208ENST00000635562 SOX18P35713 384 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 PLAURQ03405 335 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 DGKZQ13574 1117 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 PRR23CQ6ZRP0 262 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 TMEM130Q8N3G9 435 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 MUC3BQ9H195 1237 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 AKTIPQ9H8T0 292 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 TLR7Q9NYK1 1049 aaKnown RBP4.73□□□□□ -1.65
PSPC1-208ENST00000635562 ZFATQ9P243 1243 aa4.73□□□□□ -1.65
PSPC1-208ENST00000635562 KRTAP9-6A0A140TA67 174 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 PRMT3O60678 531 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 PTCD1O75127 700 aaKnown RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 GHRHP01286 108 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 PSAPP07602 524 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 EIF2AK2P19525 551 aaKnown RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 NOS3P29474 1203 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 IREB2P48200 963 aaKnown RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 FKBP5Q13451 457 aaPredicted RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 DZIP1LQ8IYY4 767 aaKnown RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 IFT43Q96FT9 208 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 PRIMPOLQ96LW4 560 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 SMG9Q9H0W8 520 aaKnown RBP4.72□□□□□ -1.65
PSPC1-208ENST00000635562 KLK14Q9P0G3 267 aa4.72□□□□□ -1.65
PSPC1-208ENST00000635562 ZBTB42B2RXF5 422 aa4.71□□□□□ -1.66
PSPC1-208ENST00000635562 DLL1O00548 723 aa4.71□□□□□ -1.66
PSPC1-208ENST00000635562 TARSP26639 723 aaKnown RBP4.71□□□□□ -1.66
PSPC1-208ENST00000635562 GRNP28799 593 aaKnown RBP4.71□□□□□ -1.66
PSPC1-208ENST00000635562 SCNN1AP37088 669 aa4.71□□□□□ -1.66
PSPC1-208ENST00000635562 KRT25Q7Z3Z0 450 aa4.71□□□□□ -1.66
PSPC1-208ENST00000635562 COL26A1Q96A83 441 aa4.71□□□□□ -1.66
PSPC1-208ENST00000635562 GZF1Q9H116 711 aaPredicted RBP4.71□□□□□ -1.66
PSPC1-208ENST00000635562 QTRT2Q9H974 415 aaKnown RBP4.71□□□□□ -1.66
PSPC1-208ENST00000635562 XYLBO75191 536 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 DEAF1O75398 565 aaPredicted RBP4.7□□□□□ -1.66
PSPC1-208ENST00000635562 LGR5O75473 907 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 SASH3O75995 380 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 CCER1Q8TC90 406 aaPredicted RBP4.7□□□□□ -1.66
PSPC1-208ENST00000635562 MEGF10Q96KG7 1140 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 PCMTD2Q9NV79 361 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 FAM13BQ9NYF5 915 aa4.7□□□□□ -1.66
PSPC1-208ENST00000635562 RTCBQ9Y3I0 505 aaKnown RBP4.7□□□□□ -1.66
PSPC1-208ENST00000635562 LOC102724428A0A0B4J2F2 783 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 FSTP19883 344 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 SERPINB4P48594 390 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 SIK1P57059 783 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 MLLT1Q03111 559 aaPredicted RBP4.69□□□□□ -1.66
PSPC1-208ENST00000635562 Q6ZS46 218 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 CAPN12Q6ZSI9 719 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 PLD4Q96BZ4 506 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 EGFL7Q9UHF1 273 aa4.69□□□□□ -1.66
PSPC1-208ENST00000635562 LOC105371045A0A1W2PR82 267 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 SOWAHDA6NJG2 315 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 F8W735 103 aaPredicted RBP4.68□□□□□ -1.66
PSPC1-208ENST00000635562 PAX4O43316 350 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 ECM1Q16610 540 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 UVSSAQ2YD98 709 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 MCTP1Q6DN14 999 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 SND1Q7KZF4 910 aaKnown RBP eCLIP4.68□□□□□ -1.66
PSPC1-208ENST00000635562 TREML1Q86YW5 311 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 CEP41Q9BYV8 373 aa4.68□□□□□ -1.66
PSPC1-208ENST00000635562 BTBD11A6QL63 1104 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 OPLAHO14841 1288 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 BRD2P25440 801 aaKnown RBP4.67□□□□□ -1.66
PSPC1-208ENST00000635562 CD97P48960 835 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 GDF6Q6KF10 455 aaPredicted RBP4.67□□□□□ -1.66
PSPC1-208ENST00000635562 HFE2Q6ZVN8 426 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 NLRP13Q86W25 1043 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 KRTAP1-3Q8IUG1 177 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 RGL4Q8IZJ4 473 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 CMTR1Q8N1G2 835 aaKnown RBP4.67□□□□□ -1.66
PSPC1-208ENST00000635562 IL22RA1Q8N6P7 574 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 SEPT3Q9UH03 358 aa4.67□□□□□ -1.66
PSPC1-208ENST00000635562 FNDC3AQ9Y2H6 1198 aaKnown RBP4.67□□□□□ -1.66
PSPC1-208ENST00000635562 FAM177BA6PVY3 158 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 DHX15O43143 795 aaKnown RBP4.66□□□□□ -1.66
PSPC1-208ENST00000635562 MMP20O60882 483 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 NPR3P17342 541 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 TMCO4Q5TGY1 634 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 SPACA7Q96KW9 195 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 GOLGA2P5Q9HBQ8 144 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 MTMR7Q9Y216 660 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 RAXQ9Y2V3 346 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 CCDC9Q9Y3X0 531 aaKnown RBP4.66□□□□□ -1.66
PSPC1-208ENST00000635562 PPME1Q9Y570 386 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 KCNMB2Q9Y691 235 aa4.66□□□□□ -1.66
PSPC1-208ENST00000635562 COL17A1Q9UMD9 1497 aaPredicted RBP4.66□□□□□ -1.66
PSPC1-208ENST00000635562 ICMTO60725 284 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 COBLO75128 1261 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 SMNDC1O75940 238 aaKnown RBP eCLIP4.65□□□□□ -1.67
PSPC1-208ENST00000635562 IGLV1-40P01703 118 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 GLB1P16278 677 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 GRIK1P39086 918 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 TXKP42681 527 aa4.65□□□□□ -1.67
PSPC1-208ENST00000635562 MFAP1P55081 439 aaKnown RBP4.65□□□□□ -1.67
PSPC1-208ENST00000635562 SETDB1Q15047 1291 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms