RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 GPR25O00155 361 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 CD33P20138 364 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 VWA5B2Q8N398 1253 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 SNX29Q8TEQ0 813 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 CSRNP1Q96S65 589 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 CHRDQ9H2X0 955 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
SMARCA2-239ENST00000635388 PNMA6FA0A0J9YX94 578 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 CDC14CA4D256 554 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 FAM9AQ8IZU1 332 aaPredicted RBP11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 SLC30A3Q99726 388 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 ABCA8O94911 1581 aa11.1□□□□□ -0.63
SMARCA2-239ENST00000635388 KDM5BQ9UGL1 1544 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 PLB1Q6P1J6 1458 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 EIF1AYO14602 144 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 LDHBP07195 334 aaKnown RBP11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 FGFR3P22607 806 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 CCINQ13939 588 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 ZFATQ9P243 1243 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 ASXL2Q76L83 1435 aa11.09□□□□□ -0.63
SMARCA2-239ENST00000635388 SASH3O75995 380 aa11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 SPEM2Q0P670 501 aa11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 DNAJC25Q9H1X3 360 aa11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 ABI2Q9NYB9 513 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 KIAA1522Q9P206 1035 aaPredicted RBP11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 CNTN3Q9P232 1028 aa11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
SMARCA2-239ENST00000635388 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-239ENST00000635388 TARSP26639 723 aaKnown RBP11.07□□□□□ -0.64
SMARCA2-239ENST00000635388 USPL1Q5W0Q7 1092 aa11.07□□□□□ -0.64
SMARCA2-239ENST00000635388 SV2AQ7L0J3 742 aa11.07□□□□□ -0.64
SMARCA2-239ENST00000635388 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
SMARCA2-239ENST00000635388 VEGFBP49765 207 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 CTBSQ01459 385 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 GAS6Q14393 721 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 KRT25Q7Z3Z0 450 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 C1orf127Q8N9H9 656 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 PHF24Q9UPV7 400 aa11.06□□□□□ -0.64
SMARCA2-239ENST00000635388 PPRC1Q5VV67 1664 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 H3BM21 787 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 MMP20O60882 483 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 CPNE3O75131 537 aaKnown RBP11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 PHACTR2O75167 634 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 NEFLP07196 543 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 GLI2P10070 1586 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 NPAS3Q8IXF0 933 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 RAPGEF6Q8TEU7 1601 aa11.05□□□□□ -0.64
SMARCA2-239ENST00000635388 C2CD2LO14523 706 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 VSIG8P0DPA2 414 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 NFKB1P19838 968 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 TRERF1Q96PN7 1200 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
SMARCA2-239ENST00000635388 KDM6BO15054 1643 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 MAP3K4Q9Y6R4 1608 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 EREGO14944 169 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 CYP2E1P05181 493 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 RARAP10276 462 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 ALG1LQ6GMV1 187 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 GPR161Q8N6U8 529 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 OR13H1Q8NG92 308 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 MRRFQ96E11 262 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 WDR7Q9Y4E6 1490 aa11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 EPRSP07814 1512 aaKnown RBP11.03□□□□□ -0.64
SMARCA2-239ENST00000635388 MAP3K6O95382 1288 aa11.02□□□□□ -0.65
SMARCA2-239ENST00000635388 FOXR1Q6PIV2 292 aa11.02□□□□□ -0.65
SMARCA2-239ENST00000635388 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 BHMTQ93088 406 aa11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 CCDC74AQ96AQ1 378 aa11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 PARP2Q9UGN5 583 aa11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
SMARCA2-239ENST00000635388 VAMP1P23763 118 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 IRS1P35568 1242 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 SOX18P35713 384 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
SMARCA2-239ENST00000635388 FGD1P98174 961 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 TTC39BQ5VTQ0 682 aaPredicted RBP11□□□□□ -0.65
SMARCA2-239ENST00000635388 GALNT12Q8IXK2 581 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 PNMA5Q96PV4 448 aa11□□□□□ -0.65
SMARCA2-239ENST00000635388 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
SMARCA2-239ENST00000635388 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 DAB2P98082 770 aa10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 PI16Q6UXB8 463 aa10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 TMC4Q7Z404 712 aa10.99□□□□□ -0.65
SMARCA2-239ENST00000635388 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms