RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 SUPT20HQ8NEM7 779 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 CD99L2Q8TCZ2 262 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
TCF4-266ENST00000628689 ERO1AQ96HE7 468 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 SIN3AQ96ST3 1273 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 GGA3Q9NZ52 723 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 KIF7Q2M1P5 1343 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 PIEZO1Q92508 2521 aa9.73□□□□□ -0.85
TCF4-266ENST00000628689 PSMD14O00487 310 aa9.72□□□□□ -0.85
TCF4-266ENST00000628689 ZBTB7BO15156 539 aaPredicted RBP9.72□□□□□ -0.85
TCF4-266ENST00000628689 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
TCF4-266ENST00000628689 TTC5Q8N0Z6 440 aa9.72□□□□□ -0.85
TCF4-266ENST00000628689 RBM17Q96I25 401 aaKnown RBP9.72□□□□□ -0.85
TCF4-266ENST00000628689 ATP6V0A2Q9Y487 856 aa9.72□□□□□ -0.85
TCF4-266ENST00000628689 LAMB4A4D0S4 1761 aa9.71□□□□□ -0.85
TCF4-266ENST00000628689 KIF4BQ2VIQ3 1234 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 NBPF11Q86T75 865 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 FAM122AQ96E09 287 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 STAP2Q9UGK3 403 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 NR2E3Q9Y5X4 410 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 ZNF609O15014 1411 aa9.71□□□□□ -0.86
TCF4-266ENST00000628689 MAP3K13O43283 966 aa9.7□□□□□ -0.86
TCF4-266ENST00000628689 HLFQ16534 295 aa9.7□□□□□ -0.86
TCF4-266ENST00000628689 SLC9C1Q4G0N8 1177 aa9.7□□□□□ -0.86
TCF4-266ENST00000628689 TMX4Q9H1E5 349 aaPredicted RBP9.7□□□□□ -0.86
TCF4-266ENST00000628689 RIC1Q4ADV7 1423 aa9.7□□□□□ -0.86
TCF4-266ENST00000628689 RGL2O15211 777 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 SLC24A1O60721 1099 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 MUC3AQ02505 3323 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 ANGEL2Q5VTE6 544 aaKnown RBP9.69□□□□□ -0.86
TCF4-266ENST00000628689 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
TCF4-266ENST00000628689 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 IFNL1Q8IU54 200 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 SHISA4Q96DD7 197 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 PTCH2Q9Y6C5 1203 aa9.69□□□□□ -0.86
TCF4-266ENST00000628689 KDM3BQ7LBC6 1761 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 PRUNE2Q8WUY3 3088 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 RPS12P25398 132 aaKnown RBP9.68□□□□□ -0.86
TCF4-266ENST00000628689 PTPN12Q05209 780 aaKnown RBP9.68□□□□□ -0.86
TCF4-266ENST00000628689 NEUROD1Q13562 356 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 SCARF1Q14162 830 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 PRAMEF18Q5VWM3 479 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 UBE2Q1Q7Z7E8 422 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 HTATIP2Q9BUP3 242 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 KCNQ5Q9NR82 932 aa9.68□□□□□ -0.86
TCF4-266ENST00000628689 SCAF8Q9UPN6 1271 aaKnown RBP9.68□□□□□ -0.86
TCF4-266ENST00000628689 IGF2BP3O00425 579 aaKnown RBP eCLIP9.67□□□□□ -0.86
TCF4-266ENST00000628689 SP3Q02447 781 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
TCF4-266ENST00000628689 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 RNF25Q96BH1 459 aaPredicted RBP9.67□□□□□ -0.86
TCF4-266ENST00000628689 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 CACNA1AO00555 2505 aa9.67□□□□□ -0.86
TCF4-266ENST00000628689 KCNQ3O43525 872 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 INHBEP58166 350 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 CRHR2Q13324 411 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 TCIRG1Q13488 830 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
TCF4-266ENST00000628689 SP8Q8IXZ3 490 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 SP7Q8TDD2 431 aaPredicted RBP9.66□□□□□ -0.86
TCF4-266ENST00000628689 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 DBNDD1Q9H9R9 158 aa9.66□□□□□ -0.86
TCF4-266ENST00000628689 RTL9Q8NET4 1388 aa9.65□□□□□ -0.86
TCF4-266ENST00000628689 RPTORQ8N122 1335 aa9.65□□□□□ -0.86
TCF4-266ENST00000628689 MANSC4A6NHS7 340 aaPredicted RBP9.65□□□□□ -0.86
TCF4-266ENST00000628689 NBPF26B4DH59 902 aa9.65□□□□□ -0.86
TCF4-266ENST00000628689 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
TCF4-266ENST00000628689 LRIT3Q3SXY7 679 aa9.65□□□□□ -0.86
TCF4-266ENST00000628689 NBPF10Q6P3W6 841 aaKnown RBP9.65□□□□□ -0.86
TCF4-266ENST00000628689 TAF1P21675 1872 aa9.65□□□□□ -0.86
TCF4-266ENST00000628689 ABCC4O15439 1325 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 EYSQ5T1H1 3165 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 RIOK3O14730 519 aaKnown RBP9.64□□□□□ -0.87
TCF4-266ENST00000628689 GABBR2O75899 941 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 BBOX1O75936 387 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 BMP8BP34820 402 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 MTFR1Q15390 333 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 LDLRAD1Q5T700 205 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 SUSD4Q5VX71 490 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 MS4A3Q96HJ5 214 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 GDF15Q99988 308 aa9.64□□□□□ -0.87
TCF4-266ENST00000628689 LAMA2P24043 3122 aaKnown RBP9.63□□□□□ -0.87
TCF4-266ENST00000628689 IL13P35225 146 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 BCAMP50895 628 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 ZNF280AP59817 542 aaPredicted RBP9.63□□□□□ -0.87
TCF4-266ENST00000628689 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 GUCD1Q96NT3 240 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 PCDHB8Q9UN66 801 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 SCN9AQ15858 1988 aa9.63□□□□□ -0.87
TCF4-266ENST00000628689 NUP98P52948 1817 aa9.62□□□□□ -0.87
TCF4-266ENST00000628689 RIMBP2O15034 1052 aa9.62□□□□□ -0.87
TCF4-266ENST00000628689 GALR2O43603 387 aaPredicted RBP9.62□□□□□ -0.87
TCF4-266ENST00000628689 EVI5O60447 810 aa9.62□□□□□ -0.87
TCF4-266ENST00000628689 VIL1P09327 827 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms