RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-229	ENST00000628515	SLAIN2	Q9P270	581 aa		18.93	■□□□□ 0.62
NRXN1-229	ENST00000628515	CCT2	P78371	535 aa	Known RBP	18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	SEC62	Q99442	399 aa	Known RBP	18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	ADCY9	O60503	1353 aa		18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	FAM208A	Q9UK61	1670 aa	Known RBP	18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	HIP1	O00291	1037 aa		18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	CCDC73	Q6ZRK6	1079 aa		18.92	■□□□□ 0.62
NRXN1-229	ENST00000628515	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	PDIA4	P13667	645 aa	Known RBP	18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	ME1	P48163	572 aa		18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	GORAB	Q5T7V8	394 aa		18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	AOPEP	Q8N6M6	819 aa		18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	USP42	Q9H9J4	1324 aa	Known RBP	18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	KIN	O60870	393 aa	Known RBP	18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	NEK1	Q96PY6	1258 aa		18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	DBF4	Q9UBU7	674 aa	Predicted RBP	18.91	■□□□□ 0.62
NRXN1-229	ENST00000628515	KIF18A	Q8NI77	898 aa		18.9	■□□□□ 0.62
NRXN1-229	ENST00000628515	ST7	Q9NRC1	585 aa		18.9	■□□□□ 0.62
NRXN1-229	ENST00000628515	DDX41	Q9UJV9	622 aa	Known RBP	18.9	■□□□□ 0.62
NRXN1-229	ENST00000628515	KMT5B	Q4FZB7	885 aa		18.9	■□□□□ 0.62
NRXN1-229	ENST00000628515	PXDNL	A1KZ92	1463 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	KAT6B	Q8WYB5	2073 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	RGPD1	P0DJD0	1748 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	REST	Q13127	1097 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	ZRSR1	Q15695	479 aa	Known RBP	18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	TOM1L2	Q6ZVM7	507 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	CFAP45	Q9UL16	551 aa		18.89	■□□□□ 0.62
NRXN1-229	ENST00000628515	MYL6B	P14649	208 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	STX1A	Q16623	288 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	NFATC2IP	Q8NCF5	419 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	KCNB2	Q92953	911 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	ZNF142	P52746	1687 aa	Predicted RBP	18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	ZBTB22	O15209	634 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	GTF3C6	Q969F1	213 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	SDF4	Q9BRK5	362 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	GOLPH3L	Q9H4A5	285 aa		18.89	■□□□□ 0.61
NRXN1-229	ENST00000628515	SMC2	O95347	1197 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	NCOA5	Q9HCD5	579 aa	Known RBP	18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	ERBB3	P21860	1342 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	GRM8	O00222	908 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	IQCB1	Q15051	598 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	CHST3	Q7LGC8	479 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	FSIP1	Q8NA03	581 aa		18.88	■□□□□ 0.61
NRXN1-229	ENST00000628515	BIN1	O00499	593 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	FBXO38	Q6PIJ6	1188 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	RIC3	Q7Z5B4	369 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	KRT222	Q8N1A0	295 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	MST1R	Q04912	1400 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	SLFNL1	Q499Z3	407 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	KSR2	Q6VAB6	950 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	TAF5L	O75529	589 aa		18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	DDX46	Q7L014	1031 aa	Known RBP	18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	ZNF397	Q8NF99	534 aa	Predicted RBP	18.87	■□□□□ 0.61
NRXN1-229	ENST00000628515	APOBR	Q0VD83	1088 aa		18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	ISM2	Q6H9L7	571 aa		18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	USP28	Q96RU2	1077 aa		18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	SCRN1	Q12765	414 aa		18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	RBM43	Q6ZSC3	357 aa	Known RBP	18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	RGPD2	P0DJD1	1756 aa		18.86	■□□□□ 0.61
NRXN1-229	ENST00000628515	RNMT	O43148	476 aa	Known RBP	18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	PXDN	Q92626	1479 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	EVA1C	P58658	441 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	PIP4K2B	P78356	416 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	MTX1	Q13505	466 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	CEP57L1	Q8IYX8	460 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	LTN1	O94822	1766 aa		18.85	■□□□□ 0.61
NRXN1-229	ENST00000628515	TRERF1	Q96PN7	1200 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	BABAM1	Q9NWV8	329 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515		A0A1B0GVL5	298 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	ALDH1L1	O75891	902 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	SLFN14	P0C7P3	912 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	TAT	P17735	454 aa	Predicted RBP	18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	SF3A1	Q15459	793 aa	Known RBP	18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	ERCC6L	Q2NKX8	1250 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	AKAP4	Q5JQC9	854 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	TMC6	Q7Z403	805 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	HOMER1	Q86YM7	354 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	KAZALD1	Q96I82	304 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	HMG20B	Q9P0W2	317 aa		18.84	■□□□□ 0.61
NRXN1-229	ENST00000628515	GABPB1	Q06547	395 aa	Predicted RBP	18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	OTUD7B	Q6GQQ9	843 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	SYT10	Q6XYQ8	523 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	CCAR2	Q8N163	923 aa	Known RBP	18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	ANO10	Q9NW15	660 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	PTPDC1	A2A3K4	754 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	CYP21A2	P08686	494 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	SNW1	Q13573	536 aa	Known RBP	18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	SYCP1	Q15431	976 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	MRFAP1L1	Q96HT8	127 aa		18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	18.83	■□□□□ 0.61
NRXN1-229	ENST00000628515	SLU7	O95391	586 aa	Known RBP	18.83	■□□□□ 0.6
NRXN1-229	ENST00000628515	CCZ1B	P86790	482 aa		18.83	■□□□□ 0.6
NRXN1-229	ENST00000628515	CCZ1	P86791	482 aa	Predicted RBP	18.83	■□□□□ 0.6
NRXN1-229	ENST00000628515	RAB11FIP4	Q86YS3	637 aa		18.83	■□□□□ 0.6
NRXN1-229	ENST00000628515	KRT32	Q14532	448 aa		18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	HDAC5	Q9UQL6	1122 aa		18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	MORC2	Q9Y6X9	1032 aa	Predicted RBP	18.82	■□□□□ 0.6
NRXN1-229	ENST00000628515	STRCP1	A6NGW2	1772 aa		18.82	■□□□□ 0.6

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