RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 DBNDD2Q9BQY9 259 aa30.44■■■□□ 2.46
CAPNS1-215ENST00000628018 SPEF2Q9C093 1822 aa30.44■■■□□ 2.46
CAPNS1-215ENST00000628018 MROH5Q6ZUA9 1318 aa30.43■■■□□ 2.46
CAPNS1-215ENST00000628018 TIMM10P62072 90 aa30.43■■■□□ 2.46
CAPNS1-215ENST00000628018 TBC1D9Q6ZT07 1266 aa30.43■■■□□ 2.46
CAPNS1-215ENST00000628018 ILDR2Q71H61 639 aa30.43■■■□□ 2.46
CAPNS1-215ENST00000628018 A0A1B0GUL7 405 aa30.42■■■□□ 2.46
CAPNS1-215ENST00000628018 ST5P78524 1137 aa30.42■■■□□ 2.46
CAPNS1-215ENST00000628018 NEUROD6Q96NK8 337 aa30.42■■■□□ 2.46
CAPNS1-215ENST00000628018 NRXN2Q9P2S2 1712 aa30.42■■■□□ 2.46
CAPNS1-215ENST00000628018 TRIM6-TRIM34B2RNG4 842 aa30.41■■■□□ 2.46
CAPNS1-215ENST00000628018 PDE8BO95263 885 aa30.4■■■□□ 2.46
CAPNS1-215ENST00000628018 ANKRD18AQ8IVF6 992 aa30.4■■■□□ 2.46
CAPNS1-215ENST00000628018 TAF1P21675 1872 aa30.39■■■□□ 2.46
CAPNS1-215ENST00000628018 ATP5JP18859 108 aa30.39■■■□□ 2.46
CAPNS1-215ENST00000628018 RILPL2Q969X0 211 aa30.39■■■□□ 2.46
CAPNS1-215ENST00000628018 ATP2B3Q16720 1220 aa30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 CELF1Q92879 486 aaKnown RBP30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 BSDC1Q9NW68 430 aaPredicted RBP30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 AK9Q5TCS8 1911 aa30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 MAP4K4O95819 1239 aaPredicted RBP30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 CNTROBQ8N137 903 aa30.37■■■□□ 2.45
CAPNS1-215ENST00000628018 DDX46Q7L014 1031 aaKnown RBP30.36■■■□□ 2.45
CAPNS1-215ENST00000628018 RPS8P62241 208 aaKnown RBP30.35■■■□□ 2.45
CAPNS1-215ENST00000628018 CRY2Q49AN0 593 aa30.35■■■□□ 2.45
CAPNS1-215ENST00000628018 XAGE2Q96GT9 111 aa30.35■■■□□ 2.45
CAPNS1-215ENST00000628018 BOLA2Q9H3K6 86 aa30.35■■■□□ 2.45
CAPNS1-215ENST00000628018 MMP10P09238 476 aa30.34■■■□□ 2.45
CAPNS1-215ENST00000628018 FGFR2P21802 821 aa30.34■■■□□ 2.45
CAPNS1-215ENST00000628018 CASC1Q6TDU7 716 aa30.34■■■□□ 2.45
CAPNS1-215ENST00000628018 A0A1B0GUL6 1792 aa30.33■■■□□ 2.45
CAPNS1-215ENST00000628018 CHRNDQ07001 517 aa30.33■■■□□ 2.45
CAPNS1-215ENST00000628018 PUM3Q15397 648 aaKnown RBP30.33■■■□□ 2.45
CAPNS1-215ENST00000628018 HELBQ8NG08 1087 aaPredicted RBP30.33■■■□□ 2.45
CAPNS1-215ENST00000628018 PARP3Q9Y6F1 533 aa30.33■■■□□ 2.45
CAPNS1-215ENST00000628018 KLRG2A4D1S0 409 aaPredicted RBP30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 ADORA1P30542 326 aa30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 MSL1Q68DK7 614 aa30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 EVI5LQ96CN4 794 aa30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 ARAP2Q8WZ64 1704 aa30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 LPIN2Q92539 896 aa30.32■■■□□ 2.44
CAPNS1-215ENST00000628018 ANKRD31Q8N7Z5 1873 aa30.31■■■□□ 2.44
CAPNS1-215ENST00000628018 TAF5LO75529 589 aa30.31■■■□□ 2.44
CAPNS1-215ENST00000628018 CHMLP26374 656 aa30.31■■■□□ 2.44
CAPNS1-215ENST00000628018 MFAP1P55081 439 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-215ENST00000628018 UPF2Q9HAU5 1272 aaKnown RBP30.31■■■□□ 2.44
CAPNS1-215ENST00000628018 EIF5BO60841 1220 aaKnown RBP30.3■■■□□ 2.44
CAPNS1-215ENST00000628018 CCDC158Q5M9N0 1113 aa30.3■■■□□ 2.44
CAPNS1-215ENST00000628018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.3■■■□□ 2.44
CAPNS1-215ENST00000628018 HAUS7Q99871 368 aa30.3■■■□□ 2.44
CAPNS1-215ENST00000628018 MINPP1Q9UNW1 487 aa30.3■■■□□ 2.44
CAPNS1-215ENST00000628018 GRAPQ13588 217 aa30.29■■■□□ 2.44
CAPNS1-215ENST00000628018 GRAPLQ8TC17 118 aaPredicted RBP30.29■■■□□ 2.44
CAPNS1-215ENST00000628018 BRIP1Q9BX63 1249 aa30.29■■■□□ 2.44
CAPNS1-215ENST00000628018 GORABQ5T7V8 394 aa30.28■■■□□ 2.44
CAPNS1-215ENST00000628018 RPGRQ92834 1020 aaKnown RBP30.28■■■□□ 2.44
CAPNS1-215ENST00000628018 SLC5A1P13866 664 aa30.27■■■□□ 2.44
CAPNS1-215ENST00000628018 HOXA10P31260 410 aaPredicted RBP30.27■■■□□ 2.44
CAPNS1-215ENST00000628018 TTC39AQ5SRH9 613 aa30.26■■■□□ 2.43
CAPNS1-215ENST00000628018 IFIT1P09914 478 aaKnown RBP30.25■■■□□ 2.43
CAPNS1-215ENST00000628018 RBM17Q96I25 401 aaKnown RBP30.25■■■□□ 2.43
CAPNS1-215ENST00000628018 ZNF512BQ96KM6 892 aaPredicted RBP30.25■■■□□ 2.43
CAPNS1-215ENST00000628018 PDGFDQ9GZP0 370 aaPredicted RBP30.25■■■□□ 2.43
CAPNS1-215ENST00000628018 SNAP23O00161 211 aa30.24■■■□□ 2.43
CAPNS1-215ENST00000628018 TBC1D32Q96NH3 1257 aa30.24■■■□□ 2.43
CAPNS1-215ENST00000628018 ESYT1Q9BSJ8 1104 aa30.24■■■□□ 2.43
CAPNS1-215ENST00000628018 DNAJC2Q99543 621 aaKnown RBP30.23■■■□□ 2.43
CAPNS1-215ENST00000628018 UBE4AQ14139 1066 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 SLC16A10Q8TF71 515 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 EDC3Q96F86 508 aaKnown RBP30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 CRAMP1Q96RY5 1269 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 ANKRD2Q9GZV1 360 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 NDUFB9Q9Y6M9 179 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 CCDC102BQ68D86 513 aa30.22■■■□□ 2.43
CAPNS1-215ENST00000628018 PDE6BP35913 854 aa30.21■■■□□ 2.43
CAPNS1-215ENST00000628018 UPF1Q92900 1129 aaKnown RBP eCLIP30.21■■■□□ 2.434e-10■■■■□ 22.9
CAPNS1-215ENST00000628018 C22orf23Q9BZE7 217 aa30.21■■■□□ 2.43
CAPNS1-215ENST00000628018 PAG1Q9NWQ8 432 aa30.21■■■□□ 2.43
CAPNS1-215ENST00000628018 FSD1Q9BTV5 496 aa30.2■■■□□ 2.42
CAPNS1-215ENST00000628018 HIP1O00291 1037 aa30.19■■■□□ 2.42
CAPNS1-215ENST00000628018 ARID4AP29374 1257 aaPredicted RBP30.19■■■□□ 2.42
CAPNS1-215ENST00000628018 PHKA1P46020 1223 aa30.19■■■□□ 2.42
CAPNS1-215ENST00000628018 SCARF1Q14162 830 aa30.19■■■□□ 2.42
CAPNS1-215ENST00000628018 RFX7Q2KHR2 1363 aa30.19■■■□□ 2.42
CAPNS1-215ENST00000628018 BBOX1O75936 387 aa30.18■■■□□ 2.42
CAPNS1-215ENST00000628018 UQCRFS1P1P0C7P4 283 aa30.18■■■□□ 2.42
CAPNS1-215ENST00000628018 SRGNP10124 158 aa30.18■■■□□ 2.42
CAPNS1-215ENST00000628018 AKAP11Q9UKA4 1901 aa30.18■■■□□ 2.42
CAPNS1-215ENST00000628018 REC8O95072 547 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 ANP32AP39687 249 aaKnown RBP30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 KBTBD3Q8NAB2 608 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 DIAPH3Q9NSV4 1193 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 COL11A2P13942 1736 aaPredicted RBP30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 GOLIM4O00461 696 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 MCAMP43121 646 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 TICAM2Q86XR7 235 aa30.17■■■□□ 2.42
CAPNS1-215ENST00000628018 WTIPA6NIX2 430 aaPredicted RBP30.16■■■□□ 2.42
CAPNS1-215ENST00000628018 SGSM2O43147 1006 aa30.16■■■□□ 2.42
CAPNS1-215ENST00000628018 NPR1P16066 1061 aa30.16■■■□□ 2.42
CAPNS1-215ENST00000628018 RBM25P49756 843 aaKnown RBP30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms