RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
CHD2-205ENST00000625662 AS3MTQ9HBK9 375 aa13.65□□□□□ -0.22
CHD2-205ENST00000625662 STX8Q9UNK0 236 aa13.65□□□□□ -0.22
CHD2-205ENST00000625662 AATKQ6ZMQ8 1374 aa13.65□□□□□ -0.22
CHD2-205ENST00000625662 GLI2P10070 1586 aa13.65□□□□□ -0.22
CHD2-205ENST00000625662 NAP1L1P55209 391 aaKnown RBP13.65□□□□□ -0.22
CHD2-205ENST00000625662 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.23
CHD2-205ENST00000625662 CASTP20810 708 aaKnown RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 SLC27A3Q5K4L6 730 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 PRPF40BQ6NWY9 871 aaKnown RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 ITGA6P23229 1130 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 SULF1Q8IWU6 871 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 TEX11Q8IYF3 940 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 ZNHIT6Q9NWK9 470 aaKnown RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 AGLP35573 1532 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 OVOS2A0A0G2JMS6 1433 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 NEFHP12036 1026 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 ME1P48163 572 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 DRC1Q96MC2 740 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CHD2-205ENST00000625662 IL6STP40189 918 aaPredicted RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 APBB1IPQ7Z5R6 666 aaPredicted RBP13.64□□□□□ -0.23
CHD2-205ENST00000625662 USP6P35125 1406 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 TNS3Q68CZ2 1445 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 CFAP65Q6ZU64 1925 aaKnown RBP13.63□□□□□ -0.23
CHD2-205ENST00000625662 RTL9Q8NET4 1388 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 WTAPQ15007 396 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 MSL1Q68DK7 614 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 PNMA2Q9UL42 364 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 EYA2O00167 538 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 MCM5P33992 734 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 NAP1L4Q99733 375 aaKnown RBP13.63□□□□□ -0.23
CHD2-205ENST00000625662 TSG101Q99816 390 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 CARD14Q9BXL6 1004 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 MYO6Q9UM54 1294 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
CHD2-205ENST00000625662 PLS1Q14651 629 aa13.63□□□□□ -0.23
CHD2-205ENST00000625662 FGFR1OPO95684 399 aaKnown RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 DALRD3Q5D0E6 543 aaKnown RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 PTPRMP28827 1452 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 GJD4Q96KN9 370 aaPredicted RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 MCM9Q9NXL9 1143 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 ADGRB3O60242 1522 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 NBPF7P0C2Y1 421 aaPredicted RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 ADRA2BP18089 450 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 IFIT1BQ5T764 474 aaKnown RBP13.62□□□□□ -0.23
CHD2-205ENST00000625662 CDC42BPGQ6DT37 1551 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 C8orf58Q8NAV2 365 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 SMARCC2Q8TAQ2 1214 aa13.62□□□□□ -0.23
CHD2-205ENST00000625662 BMP15O95972 392 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 CCDC93Q567U6 631 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 C8orf76Q96K31 380 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 PAG1Q9NWQ8 432 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
CHD2-205ENST00000625662 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
CHD2-205ENST00000625662 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
CHD2-205ENST00000625662 AMPD3Q01432 767 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 A1BGP04217 495 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 LPIN2Q92539 896 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 FAM89AQ96GI7 184 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 TCP11L1Q9NUJ3 509 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
CHD2-205ENST00000625662 TANGO6Q9C0B7 1094 aa13.61□□□□□ -0.23
CHD2-205ENST00000625662 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
CHD2-205ENST00000625662 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
CHD2-205ENST00000625662 MCMDC2Q4G0Z9 681 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 GLT8D2Q9H1C3 349 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 SPON1Q9HCB6 807 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 SAMM50Q9Y512 469 aa13.6□□□□□ -0.23
CHD2-205ENST00000625662 RNF113AO15541 343 aaKnown RBP13.6□□□□□ -0.23
CHD2-205ENST00000625662 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
CHD2-205ENST00000625662 BBOX1O75936 387 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 NEBLO76041 1014 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 CRKLP46109 303 aaKnown RBP13.59□□□□□ -0.23
CHD2-205ENST00000625662 VAT1LQ9HCJ6 419 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 KIF4AO95239 1232 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 METAP2P50579 478 aaKnown RBP eCLIP13.59□□□□□ -0.236e-7■□□□□ 11
CHD2-205ENST00000625662 USP37Q86T82 979 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 ERBB3P21860 1342 aa13.59□□□□□ -0.23
CHD2-205ENST00000625662 IRX3P78415 501 aaPredicted RBP13.58□□□□□ -0.23
CHD2-205ENST00000625662 CETN1Q12798 172 aa13.58□□□□□ -0.23
CHD2-205ENST00000625662 TEKT1Q969V4 418 aa13.58□□□□□ -0.23
CHD2-205ENST00000625662 GPHNQ9NQX3 736 aaPredicted RBP13.58□□□□□ -0.23
CHD2-205ENST00000625662 PRDM15P57071 1507 aaPredicted RBP13.58□□□□□ -0.24
CHD2-205ENST00000625662 ARHGEF40Q8TER5 1519 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 HSPA1LP34931 641 aa13.58□□□□□ -0.24
CHD2-205ENST00000625662 RRP36Q96EU6 259 aaKnown RBP13.58□□□□□ -0.24
CHD2-205ENST00000625662 SPDYE3A6NKU9 549 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms