RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DPCR1Q3MIW9 517 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 EVI5LQ96CN4 794 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 ARFGAP3Q9NP61 516 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 KIDINS220Q9ULH0 1771 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 TADA3O75528 432 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
PMS1-221ENST00000624204 USP28Q96RU2 1077 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
PMS1-221ENST00000624204 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
PMS1-221ENST00000624204 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
PMS1-221ENST00000624204 PHACTR2O75167 634 aa17.64■□□□□ 0.41
PMS1-221ENST00000624204 ZSCAN16Q9H4T2 348 aaPredicted RBP17.64■□□□□ 0.41
PMS1-221ENST00000624204 RRP15Q9Y3B9 282 aaKnown RBP17.64■□□□□ 0.41
PMS1-221ENST00000624204 FAM160A1Q05DH4 1040 aa17.64■□□□□ 0.41
PMS1-221ENST00000624204 CC2D1AQ6P1N0 951 aaPredicted RBP17.64■□□□□ 0.41
PMS1-221ENST00000624204 ADCY9O60503 1353 aa17.64■□□□□ 0.41
PMS1-221ENST00000624204 A0A1B0GVL5 298 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 CHGBP05060 677 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 FBXO31Q5XUX0 539 aaPredicted RBP17.63■□□□□ 0.41
PMS1-221ENST00000624204 PDILTQ8N807 584 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 ADAM21Q9UKJ8 722 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 MAP3K5Q99683 1374 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 EFCAB8A8MWE9 144 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 RAPGEF3O95398 923 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 CCDC61Q9Y6R9 512 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 CHST3Q7LGC8 479 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 KCND1Q9NSA2 647 aa17.63■□□□□ 0.41
PMS1-221ENST00000624204 SF3A1Q15459 793 aaKnown RBP17.62■□□□□ 0.41
PMS1-221ENST00000624204 LRRFIP1Q32MZ4 808 aaKnown RBP17.62■□□□□ 0.41
PMS1-221ENST00000624204 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 GOLGA6L1Q8N7Z2 621 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 GPATCH11Q8N954 259 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 KCNB2Q92953 911 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 LEKR1Q6ZMV7 388 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 SRLQ86TD4 932 aa17.62■□□□□ 0.41
PMS1-221ENST00000624204 TPM1P09493 284 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 Q6ZUG5 572 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 FBXO18Q8NFZ0 1043 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 GOLGA5Q8TBA6 731 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 SRRTQ9BXP5 876 aaKnown RBP17.61■□□□□ 0.41
PMS1-221ENST00000624204 GNG11P61952 73 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 MCM6Q14566 821 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 OTUD7BQ6GQQ9 843 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 CPS1P31327 1500 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 PHLPP2Q6ZVD8 1323 aa17.61■□□□□ 0.41
PMS1-221ENST00000624204 PI4KAP2A4QPH2 592 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 GIGYF1O75420 1035 aaPredicted RBP17.6■□□□□ 0.41
PMS1-221ENST00000624204 PI4KAP1Q8N8J0 262 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 CHD1O14646 1710 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 CCP110O43303 1012 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 NOP2P46087 812 aaKnown RBP17.6■□□□□ 0.41
PMS1-221ENST00000624204 ZNF589Q86UQ0 364 aaPredicted RBP17.6■□□□□ 0.41
PMS1-221ENST00000624204 USHBP1Q8N6Y0 703 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 SEC62Q99442 399 aaKnown RBP17.6■□□□□ 0.41
PMS1-221ENST00000624204 VPS18Q9P253 973 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 RCOR1Q9UKL0 485 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 REXO1L1PQ8IX06 675 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 KLHDC4Q8TBB5 520 aa17.6■□□□□ 0.41
PMS1-221ENST00000624204 FANCGO15287 622 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 PARP3Q9Y6F1 533 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 SERPINC1P01008 464 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 ATP1A3P13637 1013 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 AIMP1Q12904 312 aaKnown RBP17.59■□□□□ 0.41
PMS1-221ENST00000624204 CFAP100Q494V2 611 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 PARD6BQ9BYG5 372 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 RABEP2Q9H5N1 569 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 PPP2R3AQ06190 1150 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 ZNF396Q96N95 335 aaPredicted RBP17.59■□□□□ 0.41
PMS1-221ENST00000624204 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
PMS1-221ENST00000624204 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
PMS1-221ENST00000624204 TUBB4AP04350 444 aa17.58■□□□□ 0.41
PMS1-221ENST00000624204 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.41
PMS1-221ENST00000624204 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.41
PMS1-221ENST00000624204 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.41
PMS1-221ENST00000624204 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.41
PMS1-221ENST00000624204 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.41
PMS1-221ENST00000624204 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.4
PMS1-221ENST00000624204 HIP1O00291 1037 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 ATP8B1O43520 1251 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 ACTN2P35609 894 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 FANCCQ00597 558 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 ENGASEQ8NFI3 743 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 PREX1Q8TCU6 1659 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.4
PMS1-221ENST00000624204 H3BQF6 201 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
PMS1-221ENST00000624204 ADD1P35611 737 aaKnown RBP17.57■□□□□ 0.4
PMS1-221ENST00000624204 SCRN1Q12765 414 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 NOM1Q5C9Z4 860 aaKnown RBP17.57■□□□□ 0.4
PMS1-221ENST00000624204 ICE2Q659A1 982 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 GPR161Q8N6U8 529 aaKnown RBP17.57■□□□□ 0.4
PMS1-221ENST00000624204 NDUFA8P51970 172 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 TEFQ10587 303 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 EXOC4Q96A65 974 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
PMS1-221ENST00000624204 DNAAF4Q8WXU2 420 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms