RNA–Protein interactions for RNA: ENST00000623316.1

ATRX-210, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 803 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-210ENST00000623316 PUS7Q96PZ0 661 aaKnown RBP8.72□□□□□ -1.01
ATRX-210ENST00000623316 ELP3Q9H9T3 547 aa8.72□□□□□ -1.01
ATRX-210ENST00000623316 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
ATRX-210ENST00000623316 INPP5FQ9Y2H2 1132 aa8.72□□□□□ -1.01
ATRX-210ENST00000623316 PCDHGB7Q9Y5F8 929 aa8.72□□□□□ -1.01
ATRX-210ENST00000623316 V9GY48 417 aaPredicted RBP8.72□□□□□ -1.01
ATRX-210ENST00000623316 TSPOAP1O95153 1857 aa8.71□□□□□ -1.01
ATRX-210ENST00000623316 SMARCA5O60264 1052 aaPredicted RBP8.71□□□□□ -1.02
ATRX-210ENST00000623316 HSP90B1P14625 803 aaKnown RBP8.71□□□□□ -1.02
ATRX-210ENST00000623316 EPB42P16452 691 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 ATP4AP20648 1035 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 HPS1Q92902 700 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 DNAJC2Q99543 621 aaKnown RBP8.71□□□□□ -1.02
ATRX-210ENST00000623316 NPHS2Q9NP85 383 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 TMEM63CQ9P1W3 806 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 GGT7Q9UJ14 662 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 DDX41Q9UJV9 622 aaKnown RBP8.71□□□□□ -1.02
ATRX-210ENST00000623316 KCNMB2Q9Y691 235 aa8.71□□□□□ -1.02
ATRX-210ENST00000623316 BMP2P12643 396 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATRX-210ENST00000623316 RACK1P63244 317 aaKnown RBP8.7□□□□□ -1.02
ATRX-210ENST00000623316 TAF1CQ15572 869 aaPredicted RBP8.7□□□□□ -1.02
ATRX-210ENST00000623316 WDR44Q5JSH3 913 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 MEI1Q5TIA1 1274 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 DPH6Q7L8W6 267 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 DHX38Q92620 1227 aaKnown RBP8.7□□□□□ -1.02
ATRX-210ENST00000623316 ZIC5Q96T25 663 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 GJA3Q9Y6H8 435 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 USP31Q70CQ4 1352 aa8.7□□□□□ -1.02
ATRX-210ENST00000623316 PCF11O94913 1555 aaKnown RBP8.69□□□□□ -1.02
ATRX-210ENST00000623316 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 ABCA9Q8IUA7 1624 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 LRRIQ1Q96JM4 1722 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 CAPN5O15484 640 aaPredicted RBP8.69□□□□□ -1.02
ATRX-210ENST00000623316 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
ATRX-210ENST00000623316 POLR3DP05423 398 aaPredicted RBP8.69□□□□□ -1.02
ATRX-210ENST00000623316 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 PTPN12Q05209 780 aaKnown RBP8.69□□□□□ -1.02
ATRX-210ENST00000623316 LYSMD3Q7Z3D4 306 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 SPATA32Q96LK8 384 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 SRCIN1Q9C0H9 1055 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 TIMMDC1Q9NPL8 285 aa8.69□□□□□ -1.02
ATRX-210ENST00000623316 A0A1B0GTH6 734 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 XYLBO75191 536 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 MSX1P28360 303 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 ARID5AQ03989 594 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 C6orf118Q5T5N4 469 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 NXPE4Q6UWF7 544 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 CEP63Q96MT8 703 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 BCO2Q9BYV7 579 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 CDK11AQ9UQ88 783 aaPredicted RBP8.68□□□□□ -1.02
ATRX-210ENST00000623316 TROQ12816 1431 aaPredicted RBP8.68□□□□□ -1.02
ATRX-210ENST00000623316 FYCO1Q9BQS8 1478 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.68□□□□□ -1.02
ATRX-210ENST00000623316 CFAP43Q8NDM7 1665 aa8.68□□□□□ -1.02
ATRX-210ENST00000623316 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
ATRX-210ENST00000623316 RHOQP17081 205 aa8.67□□□□□ -1.02
ATRX-210ENST00000623316 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
ATRX-210ENST00000623316 VPS37DQ86XT2 251 aa8.67□□□□□ -1.02
ATRX-210ENST00000623316 TEX14Q8IWB6 1497 aa8.67□□□□□ -1.02
ATRX-210ENST00000623316 GMLQ99445 158 aa8.67□□□□□ -1.02
ATRX-210ENST00000623316 SRA1Q9HD15 236 aaKnown RBP8.67□□□□□ -1.02
ATRX-210ENST00000623316 EREGO14944 169 aa8.66□□□□□ -1.02
ATRX-210ENST00000623316 ST13P50502 369 aaKnown RBP8.66□□□□□ -1.02
ATRX-210ENST00000623316 TYRO3Q06418 890 aa8.66□□□□□ -1.02
ATRX-210ENST00000623316 GALNT12Q8IXK2 581 aa8.66□□□□□ -1.02
ATRX-210ENST00000623316 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
ATRX-210ENST00000623316 ABI2Q9NYB9 513 aaPredicted RBP8.66□□□□□ -1.02
ATRX-210ENST00000623316 CCDC18Q5T9S5 1454 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 PLCH2O75038 1416 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 A0A0G2JS52 829 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 RAPGEF3O95398 923 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 PMEPA1Q969W9 287 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 ARMC5Q96C12 935 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 CUEDC1Q9NWM3 386 aaPredicted RBP8.65□□□□□ -1.02
ATRX-210ENST00000623316 CNTN3Q9P232 1028 aa8.65□□□□□ -1.02
ATRX-210ENST00000623316 TTC37Q6PGP7 1564 aa8.65□□□□□ -1.03
ATRX-210ENST00000623316 ARAP3Q8WWN8 1544 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 PHLDB1Q86UU1 1377 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 GRNP28799 593 aaKnown RBP8.64□□□□□ -1.03
ATRX-210ENST00000623316 TTC39BQ5VTQ0 682 aaPredicted RBP8.64□□□□□ -1.03
ATRX-210ENST00000623316 NLRP13Q86W25 1043 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 SUV39H2Q9H5I1 410 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 GPAMQ9HCL2 828 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 KIF14Q15058 1648 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 NEO1Q92859 1461 aa8.64□□□□□ -1.03
ATRX-210ENST00000623316 VPS8Q8N3P4 1428 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 CES1P23141 567 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 PRR20EP86478 221 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 PRR20CP86479 221 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 PRR20DP86480 221 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 PRR20BP86481 221 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 PRR20AP86496 221 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 GRM2Q14416 872 aa8.63□□□□□ -1.03
ATRX-210ENST00000623316 MRPL14Q6P1L8 145 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms