RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 UBE2HP62256 183 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 PDRG1Q9NUG6 133 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 DDX19AQ9NUU7 478 aaKnown RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 ANO10Q9NW15 660 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 CTAGE5O15320 804 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 PPP1R12BO60237 982 aaPredicted RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 CWC27Q6UX04 472 aaKnown RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 FAM177A1Q8N128 213 aaPredicted RBP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 DYDC1Q8WWB3 177 aa12.04□□□□□ -0.48
COL25A1-209ENST00000622134 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL25A1-209ENST00000622134 CASQ1P31415 396 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 STK11IPQ8N1F8 1099 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 PLCD4Q9BRC7 762 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 ARFGAP3Q9NP61 516 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 A0A1W2PP64 1363 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 FSD2A1L4K1 749 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 NAA16Q6N069 864 aaPredicted RBP12.03□□□□□ -0.48
COL25A1-209ENST00000622134 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 GNAT2P19087 354 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 SSR1P43307 286 aaKnown RBP12.03□□□□□ -0.48
COL25A1-209ENST00000622134 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
COL25A1-209ENST00000622134 ARAP3Q8WWN8 1544 aa12.03□□□□□ -0.48
COL25A1-209ENST00000622134 JAKMIP1Q96N16 626 aaKnown RBP12.02□□□□□ -0.48
COL25A1-209ENST00000622134 ZNF830Q96NB3 372 aaPredicted RBP12.02□□□□□ -0.48
COL25A1-209ENST00000622134 TTC12Q9H892 705 aaPredicted RBP12.02□□□□□ -0.48
COL25A1-209ENST00000622134 KAT14Q9H8E8 782 aa12.02□□□□□ -0.48
COL25A1-209ENST00000622134 F6X3S4 739 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 ARHGEF6Q15052 776 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 NUTM1Q86Y26 1132 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL25A1-209ENST00000622134 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 CNKSR1Q969H4 720 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 THRAP3Q9Y2W1 955 aaKnown RBP12.02□□□□□ -0.49
COL25A1-209ENST00000622134 HCLS1P14317 486 aaPredicted RBP12.02□□□□□ -0.49
COL25A1-209ENST00000622134 KRT27Q7Z3Y8 459 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 NIM1KQ8IY84 436 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 SLC12A7Q9Y666 1083 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 KAT6BQ8WYB5 2073 aa12.02□□□□□ -0.49
COL25A1-209ENST00000622134 KDM5CP41229 1560 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 CNNM2Q9H8M5 875 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 ZFYVE27Q5T4F4 411 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 LARGE2Q8N3Y3 721 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 LMBR1LQ6UX01 489 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 PLBD2Q8NHP8 589 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
COL25A1-209ENST00000622134 RBM28Q9NW13 759 aaKnown RBP12.01□□□□□ -0.49
COL25A1-209ENST00000622134 ERBB4Q15303 1308 aa12.01□□□□□ -0.49
COL25A1-209ENST00000622134 ZNF790Q6PG37 636 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 CCDC150Q8NCX0 1101 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 KRT23Q9C075 422 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 VEZTQ9HBM0 779 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 TRMT1Q9NXH9 659 aaKnown RBP12□□□□□ -0.49
COL25A1-209ENST00000622134 GGA1Q9UJY5 639 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 IFIT3O14879 490 aaKnown RBP12□□□□□ -0.49
COL25A1-209ENST00000622134 U2AF2P26368 475 aaKnown RBP eCLIP12□□□□□ -0.49
COL25A1-209ENST00000622134 MATR3P43243 847 aaKnown RBP eCLIP12□□□□□ -0.49
COL25A1-209ENST00000622134 DENND2AQ9ULE3 1009 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 CCDC194A0A1B0GVG4 234 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 SSBP05455 408 aaKnown RBP eCLIP12□□□□□ -0.49
COL25A1-209ENST00000622134 POTEJP0CG39 1038 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
COL25A1-209ENST00000622134 MFSD6Q6ZSS7 791 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 LUZP1Q86V48 1076 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 SH2B1Q9NRF2 756 aaPredicted RBP12□□□□□ -0.49
COL25A1-209ENST00000622134 HMG20BQ9P0W2 317 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 CYP7A1P22680 504 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 ME1P48163 572 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 ARHGAP29Q52LW3 1261 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 FAM200AQ8TCP9 573 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 ERO1AQ96HE7 468 aa12□□□□□ -0.49
COL25A1-209ENST00000622134 TUBB4BP68371 445 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 SLC52A2Q9HAB3 445 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 H7C1D1 291 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 KIF5CO60282 957 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 LDHBP07195 334 aaKnown RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 STXBP4Q6ZWJ1 553 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 MYCBPQ99417 103 aaPredicted RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 ZCCHC11Q5TAX3 1644 aaKnown RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 TCIRG1Q13488 830 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 DPP8Q6V1X1 898 aaPredicted RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 ZNHIT6Q9NWK9 470 aaKnown RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 RSPH14Q9UHP6 348 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 HDAC1Q13547 482 aaPredicted RBP11.99□□□□□ -0.49
COL25A1-209ENST00000622134 ESR2Q92731 530 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 PLXNC1O60486 1568 aa11.99□□□□□ -0.49
COL25A1-209ENST00000622134 PDE8AO60658 829 aa11.98□□□□□ -0.49
COL25A1-209ENST00000622134 CAPN2P17655 700 aa11.98□□□□□ -0.49
COL25A1-209ENST00000622134 CAMK4Q16566 473 aa11.98□□□□□ -0.49
COL25A1-209ENST00000622134 CCDC186Q7Z3E2 898 aa11.98□□□□□ -0.49
COL25A1-209ENST00000622134 TMC4Q7Z404 712 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms