RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 NECTIN1Q15223 517 aa12.59□□□□□ -0.39
CDH1-214ENST00000621016 ERCC4Q92889 916 aaPredicted RBP12.59□□□□□ -0.39
CDH1-214ENST00000621016 ZNF594Q96JF6 807 aaPredicted RBP12.59□□□□□ -0.39
CDH1-214ENST00000621016 CEMIPQ8WUJ3 1361 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 GOLIM4O00461 696 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 ALDH1L1O75891 902 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 GABPB1Q06547 395 aaPredicted RBP12.58□□□□□ -0.4
CDH1-214ENST00000621016 VPS53Q5VIR6 699 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 RNF20Q5VTR2 975 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 ZSWIM6Q9HCJ5 1215 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 TCHHQ07283 1943 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 AOX1Q06278 1338 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 UBR1Q8IWV7 1749 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 GCKRQ14397 625 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 BRF1Q92994 677 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
CDH1-214ENST00000621016 DBNLQ9UJU6 430 aaKnown RBP12.58□□□□□ -0.4
CDH1-214ENST00000621016 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
CDH1-214ENST00000621016 NEURL1BA8MQ27 555 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
CDH1-214ENST00000621016 PXDNQ92626 1479 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 KRT85P78386 507 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 FAM184AQ8NB25 1140 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 MYCBPQ99417 103 aaPredicted RBP12.57□□□□□ -0.4
CDH1-214ENST00000621016 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 TATP17735 454 aaPredicted RBP12.57□□□□□ -0.4
CDH1-214ENST00000621016 GTF3C6Q969F1 213 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 CARD10Q9BWT7 1032 aa12.57□□□□□ -0.4
CDH1-214ENST00000621016 NCOA5Q9HCD5 579 aaKnown RBP12.57□□□□□ -0.4
CDH1-214ENST00000621016 POLR3GO15318 223 aaPredicted RBP12.56□□□□□ -0.4
CDH1-214ENST00000621016 PSMA5P28066 241 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 CABP4P57796 275 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 FKBP4Q02790 459 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDH1-214ENST00000621016 PDIA6Q15084 440 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 CTNNA3Q9UI47 895 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 HAND2P61296 217 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 Q6ZUG5 572 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 FEZ1Q99689 392 aa12.56□□□□□ -0.4
CDH1-214ENST00000621016 AP5Z1O43299 807 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 NCBP1Q09161 790 aaKnown RBP12.55□□□□□ -0.4
CDH1-214ENST00000621016 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 HOXB7P09629 217 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 ZSCAN31Q96LW9 406 aaPredicted RBP12.55□□□□□ -0.4
CDH1-214ENST00000621016 NUP62CLQ9H1M0 184 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 REREQ9P2R6 1566 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 MCM5P33992 734 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 AXDND1Q5T1B0 1012 aaPredicted RBP12.55□□□□□ -0.4
CDH1-214ENST00000621016 GORABQ5T7V8 394 aa12.55□□□□□ -0.4
CDH1-214ENST00000621016 SH2B1Q9NRF2 756 aaPredicted RBP12.55□□□□□ -0.4
CDH1-214ENST00000621016 A1BGP04217 495 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 SLC52A2Q9HAB3 445 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 EGFL6Q8IUX8 553 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 RNF217Q8TC41 542 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 C16orf45Q96MC5 204 aaPredicted RBP12.54□□□□□ -0.4
CDH1-214ENST00000621016 NEK1Q96PY6 1258 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 ANKRD65E5RJM6 399 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 RPS6KB1P23443 525 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 APOBRQ0VD83 1088 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 TNNI3KQ59H18 835 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 KRT222Q8N1A0 295 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 FPGT-TNNI3KV9GXZ4 949 aa12.54□□□□□ -0.4
CDH1-214ENST00000621016 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
CDH1-214ENST00000621016 ANO6Q4KMQ2 910 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 TAF5LO75529 589 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 ATF3P18847 181 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 MTX1Q13505 466 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 WASHC4Q2M389 1173 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 TTLL5Q6EMB2 1281 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 CEP83Q9Y592 693 aa12.53□□□□□ -0.4
CDH1-214ENST00000621016 NR1I2O75469 434 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 PTGS1P23219 599 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 NOP2P46087 812 aaKnown RBP12.52□□□□□ -0.4
CDH1-214ENST00000621016 PTPN12Q05209 780 aaKnown RBP12.52□□□□□ -0.4
CDH1-214ENST00000621016 MAP3K11Q16584 847 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.4
CDH1-214ENST00000621016 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.4
CDH1-214ENST00000621016 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 GPHNQ9NQX3 736 aaPredicted RBP12.52□□□□□ -0.4
CDH1-214ENST00000621016 NPHP3Q7Z494 1330 aa12.52□□□□□ -0.4
CDH1-214ENST00000621016 CYP21A2P08686 494 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 LRMPQ12912 555 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 ICE2Q659A1 982 aa12.52□□□□□ -0.41
CDH1-214ENST00000621016 NRBP1Q9UHY1 535 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms