RNA–Protein interactions for RNA: ENST00000620320.4

SSX4-202, Transcript of SSX family member 4, humanhuman

TSL 5 BASIC

Gene SSX4, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-202ENST00000620320 SYNE4Q8N205 404 aa7.85□□□□□ -1.15
SSX4-202ENST00000620320 NGEFQ8N5V2 710 aa7.85□□□□□ -1.15
SSX4-202ENST00000620320 CHMP4AQ9BY43 222 aa7.85□□□□□ -1.15
SSX4-202ENST00000620320 MIS18AQ9NYP9 233 aa7.85□□□□□ -1.15
SSX4-202ENST00000620320 GJA3Q9Y6H8 435 aa7.85□□□□□ -1.15
SSX4-202ENST00000620320 RANBP2P49792 3224 aaKnown RBP7.85□□□□□ -1.15
SSX4-202ENST00000620320 PITPNM2Q9BZ72 1349 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
SSX4-202ENST00000620320 NBPF26B4DH59 902 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 ERVV-1B6SEH8 477 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 RIOK3O14730 519 aaKnown RBP7.84□□□□□ -1.15
SSX4-202ENST00000620320 LMOD1P29536 600 aaPredicted RBP7.84□□□□□ -1.15
SSX4-202ENST00000620320 KIF23Q02241 960 aaPredicted RBP7.84□□□□□ -1.15
SSX4-202ENST00000620320 NBPF10Q6P3W6 841 aaKnown RBP7.84□□□□□ -1.15
SSX4-202ENST00000620320 OLFM4Q6UX06 510 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 EFCAB3Q8N7B9 438 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 CNBD1Q8NA66 436 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 MASTLQ96GX5 879 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 TBC1D2BQ9UPU7 963 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 TRIOBPQ9H2D6 2365 aa7.84□□□□□ -1.15
SSX4-202ENST00000620320 IL16Q14005 1332 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 MAP3K15Q6ZN16 1313 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 ZNF853P0CG23 659 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 IARSP41252 1262 aaKnown RBP7.83□□□□□ -1.16
SSX4-202ENST00000620320 ST5P78524 1137 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 CCDC184Q52MB2 194 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 TBC1D9BQ66K14 1250 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 RTKN2Q8IZC4 609 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 SETDB2Q96T68 719 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 GLIS2Q9BZE0 524 aaPredicted RBP7.83□□□□□ -1.16
SSX4-202ENST00000620320 PGAP2Q9UHJ9 254 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 LAMB2P55268 1798 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 BRCA2P51587 3418 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 CACNA1SQ13698 1873 aa7.83□□□□□ -1.16
SSX4-202ENST00000620320 SLX4Q8IY92 1834 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 NPHP1O15259 732 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 PIP4K2AP48426 406 aaPredicted RBP7.82□□□□□ -1.16
SSX4-202ENST00000620320 EIF6P56537 245 aaKnown RBP7.82□□□□□ -1.16
SSX4-202ENST00000620320 HUNKP57058 714 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 SPNS2Q8IVW8 549 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 JDP2Q8WYK2 163 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 NYXQ9GZU5 481 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 ZNF408Q9H9D4 720 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 MBIPQ9NS73 344 aa7.82□□□□□ -1.16
SSX4-202ENST00000620320 LAS1LQ9Y4W2 734 aaKnown RBP7.82□□□□□ -1.16
SSX4-202ENST00000620320 CACNA1FO60840 1977 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 MYL6BP14649 208 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 HOXB3P14651 431 aaPredicted RBP7.81□□□□□ -1.16
SSX4-202ENST00000620320 MMRN1Q13201 1228 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 DOK7Q18PE1 504 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 HSP90AB3PQ58FF7 597 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 RGMBQ6NW40 437 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 LRP10Q7Z4F1 713 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 NBPF5PQ86XG9 351 aaPredicted RBP7.81□□□□□ -1.16
SSX4-202ENST00000620320 DBF4Q9UBU7 674 aaPredicted RBP7.81□□□□□ -1.16
SSX4-202ENST00000620320 NIP7Q9Y221 180 aaKnown RBP eCLIP7.81□□□□□ -1.16
SSX4-202ENST00000620320 CEP290O15078 2479 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 TRPM7Q96QT4 1865 aa7.81□□□□□ -1.16
SSX4-202ENST00000620320 CCER2I3L3R5 266 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 EIF2S2P20042 333 aaKnown RBP7.8□□□□□ -1.16
SSX4-202ENST00000620320 TPTE2Q6XPS3 522 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 GIGYF2Q6Y7W6 1299 aaKnown RBP7.8□□□□□ -1.16
SSX4-202ENST00000620320 CDC37L1Q7L3B6 337 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 WWC1Q8IX03 1113 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 CCDC102AQ96A19 550 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 RNF25Q96BH1 459 aaPredicted RBP7.8□□□□□ -1.16
SSX4-202ENST00000620320 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 ADARB2Q9NS39 739 aaKnown RBP7.8□□□□□ -1.16
SSX4-202ENST00000620320 HDAC9Q9UKV0 1011 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 GTF3C3Q9Y5Q9 886 aa7.8□□□□□ -1.16
SSX4-202ENST00000620320 KLRG2A4D1S0 409 aaPredicted RBP7.79□□□□□ -1.16
SSX4-202ENST00000620320 NPR1P16066 1061 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 PDIA6Q15084 440 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 PARP10Q53GL7 1025 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 DUSP27Q5VZP5 1158 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 FBXO46Q6PJ61 603 aaPredicted RBP7.79□□□□□ -1.16
SSX4-202ENST00000620320 DLK2Q6UY11 383 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 TTLL7Q6ZT98 887 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 WDR63Q8IWG1 891 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
SSX4-202ENST00000620320 ZNF296Q8WUU4 475 aaPredicted RBP7.79□□□□□ -1.16
SSX4-202ENST00000620320 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 HYPKQ9NX55 129 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 GPRC5DQ9NZD1 345 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 CHPF2Q9P2E5 772 aa7.79□□□□□ -1.16
SSX4-202ENST00000620320 UBN2Q6ZU65 1347 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 DDX60Q8IY21 1712 aaKnown RBP7.78□□□□□ -1.16
SSX4-202ENST00000620320 CENPFP49454 3210 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.78□□□□□ -1.16
SSX4-202ENST00000620320 FAM205CA6NFA0 338 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 HOXB1P14653 301 aaPredicted RBP7.78□□□□□ -1.16
SSX4-202ENST00000620320 ZNF157P51786 506 aaPredicted RBP7.78□□□□□ -1.16
SSX4-202ENST00000620320 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
SSX4-202ENST00000620320 HLFQ16534 295 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 KRT24Q2M2I5 525 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 PROSER3Q2NL68 480 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 CCDC30Q5VVM6 783 aa7.78□□□□□ -1.16
SSX4-202ENST00000620320 PPP1R42Q7Z4L9 355 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms