RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 DPEP1P16444 411 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 HTRA3P83110 453 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 SLC4A9Q96Q91 983 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 SIN3AQ96ST3 1273 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 USB1Q9BQ65 265 aaKnown RBP10.14□□□□□ -0.79
SENP3-210ENST00000619785 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 ATG3Q9NT62 314 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.14□□□□□ -0.79
SENP3-210ENST00000619785 BCS1LQ9Y276 419 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 IVNS1ABPQ9Y6Y0 642 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 ANKRD31Q8N7Z5 1873 aa10.14□□□□□ -0.79
SENP3-210ENST00000619785 SCN4AP35499 1836 aa10.13□□□□□ -0.79
SENP3-210ENST00000619785 TMF1P82094 1093 aa10.13□□□□□ -0.79
SENP3-210ENST00000619785 CCDC87Q9NVE4 849 aa10.13□□□□□ -0.79
SENP3-210ENST00000619785 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
SENP3-210ENST00000619785 ASAP1Q9ULH1 1129 aa10.13□□□□□ -0.79
SENP3-210ENST00000619785 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 RPS6KA4O75676 772 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 FBXO45P0C2W1 286 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 PHKG2P15735 406 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
SENP3-210ENST00000619785 ARHGAP27Q6ZUM4 889 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 FOXD4L4Q8WXT5 416 aaPredicted RBP10.12□□□□□ -0.79
SENP3-210ENST00000619785 PIM2Q9P1W9 311 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 WWC3Q9ULE0 1092 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 SPG7Q9UQ90 795 aa10.12□□□□□ -0.79
SENP3-210ENST00000619785 RTCBQ9Y3I0 505 aaKnown RBP10.12□□□□□ -0.79
SENP3-210ENST00000619785 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 ADAMTSL1Q8N6G6 1762 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 TMEM88BA6NKF7 163 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 HSPA1AP0DMV8 641 aaKnown RBP10.11□□□□□ -0.79
SENP3-210ENST00000619785 HSPA1BP0DMV9 641 aaKnown RBP10.11□□□□□ -0.79
SENP3-210ENST00000619785 RNF19BQ6ZMZ0 732 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 TMOD3Q9NYL9 352 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 THSD7BQ9C0I4 1608 aa10.11□□□□□ -0.79
SENP3-210ENST00000619785 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
SENP3-210ENST00000619785 BHMG1C9JSJ3 638 aaPredicted RBP10.1□□□□□ -0.79
SENP3-210ENST00000619785 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
SENP3-210ENST00000619785 EMP3P54852 163 aa10.1□□□□□ -0.79
SENP3-210ENST00000619785 CCDC27Q2M243 656 aa10.1□□□□□ -0.79
SENP3-210ENST00000619785 C16orf71Q8IYS4 520 aaPredicted RBP10.1□□□□□ -0.79
SENP3-210ENST00000619785 IFNL2Q8IZJ0 200 aa10.1□□□□□ -0.79
SENP3-210ENST00000619785 NFATC2IPQ8NCF5 419 aa10.1□□□□□ -0.79
SENP3-210ENST00000619785 COL11A2P13942 1736 aaPredicted RBP10.1□□□□□ -0.79
SENP3-210ENST00000619785 USP42Q9H9J4 1324 aaKnown RBP10.09□□□□□ -0.79
SENP3-210ENST00000619785 FMNL1O95466 1100 aaPredicted RBP10.09□□□□□ -0.79
SENP3-210ENST00000619785 SKIP12755 728 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 DDR1Q08345 913 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
SENP3-210ENST00000619785 BLOC1S3Q6QNY0 202 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 ZNF592Q92610 1267 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 GGNBP2Q9H3C7 697 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 RRAGCQ9HB90 399 aa10.09□□□□□ -0.79
SENP3-210ENST00000619785 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
SENP3-210ENST00000619785 GLTPD2A6NH11 291 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 GOLGA8CPA6NN73 597 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 POTECB2RU33 542 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 TK2O00142 265 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 TM4SF1P30408 202 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 CTHP32929 405 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 PPP4CP60510 307 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 RNF181Q9P0P0 153 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 MRC1P22897 1456 aa10.08□□□□□ -0.8
SENP3-210ENST00000619785 SCN7AQ01118 1682 aa10.07□□□□□ -0.8
SENP3-210ENST00000619785 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
SENP3-210ENST00000619785 POLRMTO00411 1230 aaKnown RBP10.07□□□□□ -0.8
SENP3-210ENST00000619785 VEGFAP15692 232 aaPredicted RBP10.07□□□□□ -0.8
SENP3-210ENST00000619785 ELOAQ14241 798 aaKnown RBP10.07□□□□□ -0.8
SENP3-210ENST00000619785 SND1Q7KZF4 910 aaKnown RBP eCLIP10.07□□□□□ -0.8
SENP3-210ENST00000619785 ANKK1Q8NFD2 765 aa10.07□□□□□ -0.8
SENP3-210ENST00000619785 PRDM10Q9NQV6 1147 aa10.07□□□□□ -0.8
SENP3-210ENST00000619785 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
SENP3-210ENST00000619785 USP17L3A6NCW0 530 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 USP17L4A6NCW7 530 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 PIK3CDO00329 1044 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 NR1I2O75469 434 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 JUNDP17535 347 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 PTPRNQ16849 979 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 BRICD5Q6PL45 260 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 USP17L2Q6R6M4 530 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 USP17L1Q7RTZ2 530 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 CARD14Q9BXL6 1004 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 MAP10Q9P2G4 905 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 PCDHB3Q9Y5E6 796 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 CACNA1SQ13698 1873 aa10.06□□□□□ -0.8
SENP3-210ENST00000619785 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
SENP3-210ENST00000619785 LMNB1P20700 586 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 RFC4P35249 363 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 SLFNL1Q499Z3 407 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 SCUBE3Q8IX30 993 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 PCDH10Q9P2E7 1040 aa10.05□□□□□ -0.8
SENP3-210ENST00000619785 NOVA2Q9UNW9 492 aaKnown RBP10.05□□□□□ -0.8
SENP3-210ENST00000619785 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
SENP3-210ENST00000619785 PTK2Q05397 1052 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms