RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 DDR1Q08345 913 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 TWISTNBQ3B726 338 aaPredicted RBP8.54□□□□□ -1.04
CBWD3-214ENST00000618921 FAM43AQ8N2R8 423 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 TBC1D2Q9BYX2 928 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 MYH14Q7Z406 1995 aaKnown RBP8.54□□□□□ -1.04
CBWD3-214ENST00000618921 OSBPP22059 807 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 ANAPC15P60006 121 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 IFNL1Q8IU54 200 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 ANTXR1Q9H6X2 564 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 CNTNAP4Q9C0A0 1308 aa8.54□□□□□ -1.04
CBWD3-214ENST00000618921 LMNB1P20700 586 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 TM4SF1P30408 202 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 HSP90AA2PQ14568 343 aaPredicted RBP8.53□□□□□ -1.04
CBWD3-214ENST00000618921 BMP2KLQ5H9B9 411 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 THUMPD2Q9BTF0 503 aaKnown RBP8.53□□□□□ -1.04
CBWD3-214ENST00000618921 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
CBWD3-214ENST00000618921 ERVV-2B6SEH9 535 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 FOXN1O15353 648 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
CBWD3-214ENST00000618921 CNPY4Q8N129 248 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 TSPYL6Q8N831 410 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 MKRN1Q9UHC7 482 aaKnown RBP8.53□□□□□ -1.04
CBWD3-214ENST00000618921 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
CBWD3-214ENST00000618921 KDRP35968 1356 aa8.52□□□□□ -1.04
CBWD3-214ENST00000618921 POLRMTO00411 1230 aaKnown RBP8.52□□□□□ -1.05
CBWD3-214ENST00000618921 PTCD1O75127 700 aaKnown RBP8.52□□□□□ -1.05
CBWD3-214ENST00000618921 CRKLP46109 303 aaKnown RBP8.52□□□□□ -1.05
CBWD3-214ENST00000618921 HSCBQ8IWL3 235 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 LNPKQ9C0E8 428 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 SLKQ9H2G2 1235 aaPredicted RBP8.52□□□□□ -1.05
CBWD3-214ENST00000618921 PPME1Q9Y570 386 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 CCDC88AQ3V6T2 1871 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 DLG5Q8TDM6 1919 aa8.52□□□□□ -1.05
CBWD3-214ENST00000618921 EIF4A2Q14240 407 aaKnown RBP8.51□□□□□ -1.05
CBWD3-214ENST00000618921 HSP90AB4PQ58FF6 505 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 MYSM1Q5VVJ2 828 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 SNX21Q969T3 373 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 MRRFQ96E11 262 aaKnown RBP8.51□□□□□ -1.05
CBWD3-214ENST00000618921 VRTNQ9H8Y1 702 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 CHMP5Q9NZZ3 219 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 KDM6AO15550 1401 aaPredicted RBP8.51□□□□□ -1.05
CBWD3-214ENST00000618921 USP42Q9H9J4 1324 aaKnown RBP8.51□□□□□ -1.05
CBWD3-214ENST00000618921 ANKRD62A6NC57 917 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 C8orf58Q8NAV2 365 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 PRDM4Q9UKN5 801 aa8.51□□□□□ -1.05
CBWD3-214ENST00000618921 CLK2P49760 499 aaKnown RBP8.5□□□□□ -1.05
CBWD3-214ENST00000618921 CABP4P57796 275 aa8.5□□□□□ -1.05
CBWD3-214ENST00000618921 DSG2Q14126 1118 aa8.5□□□□□ -1.05
CBWD3-214ENST00000618921 SULT6B1Q6IMI4 303 aa8.5□□□□□ -1.05
CBWD3-214ENST00000618921 DPY19L2Q6NUT2 758 aa8.5□□□□□ -1.05
CBWD3-214ENST00000618921 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
CBWD3-214ENST00000618921 SGSM3Q96HU1 749 aa8.5□□□□□ -1.05
CBWD3-214ENST00000618921 ELL2O00472 640 aaPredicted RBP8.49□□□□□ -1.05
CBWD3-214ENST00000618921 CHL1O00533 1208 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 GTF2E1P29083 439 aaPredicted RBP8.49□□□□□ -1.05
CBWD3-214ENST00000618921 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 USPL1Q5W0Q7 1092 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 INTS3Q68E01 1043 aaKnown RBP8.49□□□□□ -1.05
CBWD3-214ENST00000618921 TTLL6Q8N841 843 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 NFATC2IPQ8NCF5 419 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 COL5A3P25940 1745 aaPredicted RBP8.49□□□□□ -1.05
CBWD3-214ENST00000618921 PTPRCP08575 1304 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 ZNF831Q5JPB2 1677 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 NFKBIEO00221 500 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 ZPR1O75312 459 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 PTGDRQ13258 359 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 ZNF662Q6ZS27 426 aa8.49□□□□□ -1.05
CBWD3-214ENST00000618921 HSP90AB1P08238 724 aaKnown RBP8.48□□□□□ -1.05
CBWD3-214ENST00000618921 POTEIP0CG38 1075 aa8.48□□□□□ -1.05
CBWD3-214ENST00000618921 POTEJP0CG39 1038 aa8.48□□□□□ -1.05
CBWD3-214ENST00000618921 NFIXQ14938 502 aa8.48□□□□□ -1.05
CBWD3-214ENST00000618921 L1TD1Q5T7N2 865 aaKnown RBP8.48□□□□□ -1.05
CBWD3-214ENST00000618921 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
CBWD3-214ENST00000618921 SREK1Q8WXA9 508 aaKnown RBP8.48□□□□□ -1.05
CBWD3-214ENST00000618921 CDC45O75419 566 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 CTCFP49711 727 aaPredicted RBP8.47□□□□□ -1.05
CBWD3-214ENST00000618921 LBX1P52954 281 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 GRIPAP1Q4V328 841 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 SIRT2Q8IXJ6 389 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 RPAP2Q8IXW5 612 aaPredicted RBP8.47□□□□□ -1.05
CBWD3-214ENST00000618921 DCTPP1Q9H773 170 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 TPD52L2O43399 206 aaKnown RBP8.47□□□□□ -1.05
CBWD3-214ENST00000618921 SERPINB2P05120 415 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 MCM4P33991 863 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 VEGFBP49765 207 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 ERFEQ4G0M1 354 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
CBWD3-214ENST00000618921 C2CD5Q86YS7 1000 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 ANKRD44Q8N8A2 993 aa8.47□□□□□ -1.05
CBWD3-214ENST00000618921 H0YIN7 160 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms