RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 SLC10A3P09131 477 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 MFSD10Q14728 455 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 USP48Q86UV5 1035 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 JDP2Q8WYK2 163 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 LRCH3Q96II8 777 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 EYA1Q99502 592 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 ADARB2Q9NS39 739 aaKnown RBP9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 EMILIN1Q9Y6C2 1016 aa9.75□□□□□ -0.85
SCAMP1-206ENST00000618166 CEP290O15078 2479 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 NFATC2IPQ8NCF5 419 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 PGAP2Q9UHJ9 254 aa9.74□□□□□ -0.85
SCAMP1-206ENST00000618166 AKAP11Q9UKA4 1901 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 SHTN1A0MZ66 631 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 CDC37L1Q7L3B6 337 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 RTKN2Q8IZC4 609 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 CNBD1Q8NA66 436 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 R3HDMLQ9H3Y0 253 aa9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 GBA2Q9HCG7 927 aaPredicted RBP9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 V9GY48 417 aaPredicted RBP9.73□□□□□ -0.85
SCAMP1-206ENST00000618166 GPR25O00155 361 aa9.72□□□□□ -0.85
SCAMP1-206ENST00000618166 CANXP27824 592 aaKnown RBP9.72□□□□□ -0.85
SCAMP1-206ENST00000618166 TJAP1Q5JTD0 557 aa9.72□□□□□ -0.85
SCAMP1-206ENST00000618166 RAB3GAP2Q9H2M9 1393 aa9.72□□□□□ -0.85
SCAMP1-206ENST00000618166 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
SCAMP1-206ENST00000618166 FYB1O15117 783 aa9.71□□□□□ -0.86
SCAMP1-206ENST00000618166 NPHP1O15259 732 aa9.71□□□□□ -0.86
SCAMP1-206ENST00000618166 GMPSP49915 693 aaPredicted RBP9.71□□□□□ -0.86
SCAMP1-206ENST00000618166 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
SCAMP1-206ENST00000618166 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 EYSQ5T1H1 3165 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 ADM5C9JUS6 153 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 ST5P78524 1137 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 RASAL3Q86YV0 1011 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 PRO3102Q9H379 93 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 RBBP6Q7Z6E9 1792 aaKnown RBP9.7□□□□□ -0.86
SCAMP1-206ENST00000618166 SCN7AQ01118 1682 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 PPM1GO15355 546 aaPredicted RBP9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 NPR1P16066 1061 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 INTS3Q68E01 1043 aaKnown RBP9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 Q7L0L9 218 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 C2orf69Q8N8R5 385 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 ZNF775Q96BV0 537 aaPredicted RBP9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 PSMD1Q99460 953 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 EPAS1Q99814 870 aa9.69□□□□□ -0.86
SCAMP1-206ENST00000618166 ROCK2O75116 1388 aaKnown RBP9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 SLC39A6Q13433 755 aa9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 TRIM17Q9Y577 477 aa9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 MUC3AQ02505 3323 aa9.68□□□□□ -0.86
SCAMP1-206ENST00000618166 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 FKTNO75072 461 aa9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 EIF5P55010 431 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 PPP4CP60510 307 aa9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 CXCL9Q07325 125 aa9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 PPP1R18Q6NYC8 613 aa9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 ZNF330Q9Y3S2 320 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-206ENST00000618166 KIF24Q5T7B8 1368 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 EGFRP00533 1210 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 MTHFSP49914 203 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 OTOP1Q7RTM1 612 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
SCAMP1-206ENST00000618166 KIAA0100Q14667 2235 aaKnown RBP9.65□□□□□ -0.86
SCAMP1-206ENST00000618166 KLRG2A4D1S0 409 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-206ENST00000618166 AOC3Q16853 763 aa9.65□□□□□ -0.86
SCAMP1-206ENST00000618166 KRT26Q7Z3Y9 468 aa9.65□□□□□ -0.86
SCAMP1-206ENST00000618166 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
SCAMP1-206ENST00000618166 PLA2G5P39877 138 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 ARMC5Q96C12 935 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 IL21Q9HBE4 155 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 STXBP5LQ9Y2K9 1186 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 LAMB4A4D0S4 1761 aa9.64□□□□□ -0.87
SCAMP1-206ENST00000618166 MRC1P22897 1456 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 CAMTA2O94983 1202 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 NOM1Q5C9Z4 860 aaKnown RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 MOB2Q70IA6 237 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 SAMD7Q7Z3H4 446 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 NBPF5PQ86XG9 351 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 WTIPA6NIX2 430 aaPredicted RBP9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 PPIP5K2O43314 1243 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 RAD17O75943 681 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 CAP1Q01518 475 aa9.63□□□□□ -0.87
SCAMP1-206ENST00000618166 DPF3Q92784 378 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms