RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 COL15A1P39059 1388 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 BCL9O00512 1426 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 EXOC5O00471 708 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 LARGE1O95461 756 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 CCDC129Q6ZRS4 1044 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 IL17RAQ96F46 866 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 PDLIM2Q96JY6 352 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
PCDHGA9-202ENST00000616887 TCIRG1Q13488 830 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 CAVIN1Q6NZI2 390 aaKnown RBP13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 TCEANC2Q96MN5 208 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 TTC14Q96N46 770 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 RBM8AQ9Y5S9 174 aaKnown RBP13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 VGLL3A8MV65 326 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 CUL4AQ13619 759 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 RUFY2Q8WXA3 655 aa13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 JAKMIP1Q96N16 626 aaKnown RBP13.64□□□□□ -0.23
PCDHGA9-202ENST00000616887 ITGB4P16144 1822 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 TBC1D2BQ9UPU7 963 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 CYP19A1P11511 503 aaPredicted RBP13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 ATP5JP18859 108 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 ZNF445P59923 1031 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 NUCB2P80303 420 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 NECTIN1Q15223 517 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 KIF6Q6ZMV9 814 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 BARGINQ6ZT62 677 aa13.63□□□□□ -0.23
PCDHGA9-202ENST00000616887 STARD3NLO95772 234 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 ATP2B3Q16720 1220 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 CWC22Q9HCG8 908 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 MED23Q9ULK4 1368 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 KCNJ4P48050 445 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 FAM98CQ17RN3 349 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 ZNF710Q8N1W2 664 aa13.62□□□□□ -0.23
PCDHGA9-202ENST00000616887 MCM5P33992 734 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 MCM2P49736 904 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 RBM6P78332 1123 aaKnown RBP13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 ZNF609O15014 1411 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 EYA2O00167 538 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 IGSF3O75054 1194 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 RXRBP28702 533 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 MYRIPQ8NFW9 859 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 IPO4Q8TEX9 1081 aaKnown RBP13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
PCDHGA9-202ENST00000616887 A0A1B0GUL7 405 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 GOLIM4O00461 696 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 EPB41L2O43491 1005 aaKnown RBP13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 ADORA1P30542 326 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 CLEC17AQ6ZS10 378 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 FAM177BA6PVY3 158 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 SLC27A2O14975 620 aa13.6□□□□□ -0.23
PCDHGA9-202ENST00000616887 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 ST3GAL1Q11201 340 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 DDB1Q16531 1140 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 MARCH10Q8NA82 808 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 HAUS7Q99871 368 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 TAF5LO75529 589 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 IL15P40933 162 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
PCDHGA9-202ENST00000616887 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.23
PCDHGA9-202ENST00000616887 ZBTB22O15209 634 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 PRPF40AO75400 957 aaKnown RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 PI16Q6UXB8 463 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 GREM2Q9H772 168 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 SNRKQ9NRH2 765 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 PDRG1Q9NUG6 133 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 DOT1LQ8TEK3 1739 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 HIP1O00291 1037 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 KCNQ2O43526 872 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 BRD1O95696 1058 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 KCNQ4P56696 695 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 VPS53Q5VIR6 699 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 CCDC83Q8IWF9 413 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 NECAB1Q8N987 351 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 ZBTB38Q8NAP3 1195 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 GDPD2Q9HCC8 539 aa13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
PCDHGA9-202ENST00000616887 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 SCARF1Q14162 830 aa13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 INTS4Q96HW7 963 aaKnown RBP13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 ZSWIM6Q9HCJ5 1215 aa13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
PCDHGA9-202ENST00000616887 KCNB2Q92953 911 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms