RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 FAM83GA6ND36 823 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 KANK3Q6NY19 840 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 OVOS2A0A0G2JMS6 1433 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 OVOS2A0A0J9YW53 1432 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 OVOS2Q6IE36 1432 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 DCAF15Q66K64 600 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 WDR17Q8IZU2 1322 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 NBPF7P0C2Y1 421 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 CCDC192P0DO97 292 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 ERCC4Q92889 916 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 MCMDC2Q4G0Z9 681 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 ZNF710Q8N1W2 664 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 SMARCC2Q8TAQ2 1214 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
TNFRSF9-204ENST00000615230 RNF113AO15541 343 aaKnown RBP11.27□□□□□ -0.6
TNFRSF9-204ENST00000615230 DKC1O60832 514 aaKnown RBP eCLIP11.27□□□□□ -0.6
TNFRSF9-204ENST00000615230 TRIM27P14373 513 aa11.27□□□□□ -0.6
TNFRSF9-204ENST00000615230 TNNT3P45378 269 aaPredicted RBP11.27□□□□□ -0.6
TNFRSF9-204ENST00000615230 C2CD5Q86YS7 1000 aa11.27□□□□□ -0.6
TNFRSF9-204ENST00000615230 TSPY26PQ9H489 355 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 C6orf50Q9HD87 102 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 IARSP41252 1262 aaKnown RBP11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 PICALMQ13492 652 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 PHKG2P15735 406 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 METAP2P50579 478 aaKnown RBP eCLIP11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 USP48Q86UV5 1035 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 FAM114A1Q8IWE2 563 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 PDILTQ8N807 584 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 PAG1Q9NWQ8 432 aa11.27□□□□□ -0.61
TNFRSF9-204ENST00000615230 RUFY1Q96T51 708 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 HELLSQ9NRZ9 838 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 UNC13BO14795 1591 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 DCPSQ96C86 337 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 TESK2Q96S53 571 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 DEF6Q9H4E7 631 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 BIN2Q9UBW5 565 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 CDC42BPAQ5VT25 1732 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 TNS3Q68CZ2 1445 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 CALML3P27482 149 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 VPS36Q86VN1 386 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 ZMYM4Q5VZL5 1548 aa11.26□□□□□ -0.61
TNFRSF9-204ENST00000615230 F8W031 263 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 MYCNP04198 464 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 CTAGE5O15320 804 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 JAKMIP3Q5VZ66 844 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 SCAND2PQ9GZW5 306 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 USP6P35125 1406 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 LMTK2Q8IWU2 1503 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 ERCC6L2Q5T890 1561 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 ANKRD44Q8N8A2 993 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 CAGE1Q8TC20 777 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 PPIP5K2O43314 1243 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 ITGA6P23229 1130 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 MCTP2Q6DN12 878 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 CSADQ9Y600 493 aa11.25□□□□□ -0.61
TNFRSF9-204ENST00000615230 CAMSAP1Q5T5Y3 1602 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 ZBED4O75132 1171 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 AOX1Q06278 1338 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 TBCAO75347 108 aaKnown RBP11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 DLGAP5Q15398 846 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 RMND1Q9NWS8 449 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 SERPINC1P01008 464 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 TEX11Q8IYF3 940 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 LPIN2Q92539 896 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 METP08581 1390 aa11.24□□□□□ -0.61
TNFRSF9-204ENST00000615230 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 EYA2O00167 538 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 GRM1Q13255 1194 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 TTC22Q5TAA0 569 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 ARHGAP27Q6ZUM4 889 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 CCAR2Q8N163 923 aaKnown RBP11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 LRRC45Q96CN5 670 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 BCS1LQ9Y276 419 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 SAMM50Q9Y512 469 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 CCDC172P0C7W6 258 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 GNA11P29992 359 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 CROCC2H7BZ55 1655 aa11.23□□□□□ -0.61
TNFRSF9-204ENST00000615230 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms