RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 RGPD5Q99666 1765 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 AFDNP55196 1824 aaKnown RBP20.1■□□□□ 0.81
EWSR1-221ENST00000610553 H3BQV1 296 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 CHGBP05060 677 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 PPP4R3BQ5MIZ7 849 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 DRC7Q8IY82 874 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 DDX11Q96FC9 970 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 SLC52A2Q9HAB3 445 aa20.1■□□□□ 0.81
EWSR1-221ENST00000610553 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
EWSR1-221ENST00000610553 STRCP1A6NGW2 1772 aa20.09■□□□□ 0.81
EWSR1-221ENST00000610553 HSP90B1P14625 803 aaKnown RBP20.09■□□□□ 0.81
EWSR1-221ENST00000610553 CDC25BP30305 580 aa20.09■□□□□ 0.81
EWSR1-221ENST00000610553 SEC62Q99442 399 aaKnown RBP20.09■□□□□ 0.81
EWSR1-221ENST00000610553 HAUS7Q99871 368 aa20.09■□□□□ 0.81
EWSR1-221ENST00000610553 LLPHQ9BRT6 129 aaKnown RBP20.09■□□□□ 0.81
EWSR1-221ENST00000610553 ERBB3P21860 1342 aa20.09■□□□□ 0.81
EWSR1-221ENST00000610553 ADD1P35611 737 aaKnown RBP20.09■□□□□ 0.81
EWSR1-221ENST00000610553 MCMDC2Q4G0Z9 681 aa20.09■□□□□ 0.81
EWSR1-221ENST00000610553 PDCL2Q8N4E4 241 aa20.08■□□□□ 0.81
EWSR1-221ENST00000610553 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.81
EWSR1-221ENST00000610553 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 PFKFB2O60825 505 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 IQCB1Q15051 598 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 SARM1Q6SZW1 724 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 STOX1Q6ZVD7 989 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 DNAJC2Q99543 621 aaKnown RBP20.08■□□□□ 0.8
EWSR1-221ENST00000610553 DBNDD2Q9BQY9 259 aa20.08■□□□□ 0.8
EWSR1-221ENST00000610553 ARFGEF2Q9Y6D5 1785 aa20.07■□□□□ 0.8
EWSR1-221ENST00000610553 ATP2B3Q16720 1220 aa20.07■□□□□ 0.8
EWSR1-221ENST00000610553 NAA16Q6N069 864 aaPredicted RBP20.07■□□□□ 0.8
EWSR1-221ENST00000610553 ANKRD13DQ6ZTN6 518 aa20.07■□□□□ 0.8
EWSR1-221ENST00000610553 C16orf45Q96MC5 204 aaPredicted RBP20.07■□□□□ 0.8
EWSR1-221ENST00000610553 PRDM10Q9NQV6 1147 aa20.07■□□□□ 0.8
EWSR1-221ENST00000610553 ZSCAN20P17040 1043 aaPredicted RBP20.07■□□□□ 0.8
EWSR1-221ENST00000610553 NSUN7Q8NE18 718 aaKnown RBP20.07■□□□□ 0.8
EWSR1-221ENST00000610553 CACTINQ8WUQ7 758 aaKnown RBP20.07■□□□□ 0.8
EWSR1-221ENST00000610553 CCDC144BQ3MJ40 725 aa20.06■□□□□ 0.8
EWSR1-221ENST00000610553 CCDC144CPQ8IYA2 1237 aa20.06■□□□□ 0.8
EWSR1-221ENST00000610553 LRRC2Q9BYS8 371 aa20.06■□□□□ 0.8
EWSR1-221ENST00000610553 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
EWSR1-221ENST00000610553 SMTNL1A8MU46 457 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
EWSR1-221ENST00000610553 DDX46Q7L014 1031 aaKnown RBP20.05■□□□□ 0.8
EWSR1-221ENST00000610553 UBE3BQ7Z3V4 1068 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 KBTBD3Q8NAB2 608 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
EWSR1-221ENST00000610553 RCOR1Q9UKL0 485 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 CTAGE5O15320 804 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 CTDNEP1O95476 244 aa20.05■□□□□ 0.8
EWSR1-221ENST00000610553 C11orf57Q6ZUT1 292 aaPredicted RBP20.05■□□□□ 0.8
EWSR1-221ENST00000610553 SYCP1Q15431 976 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 DHX32Q7L7V1 743 aaKnown RBP20.04■□□□□ 0.8
EWSR1-221ENST00000610553 AGXT2Q9BYV1 514 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 TMEM94Q12767 1356 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 DMTNQ08495 405 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 NCBP1Q09161 790 aaKnown RBP20.04■□□□□ 0.8
EWSR1-221ENST00000610553 STX1AQ16623 288 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 UTP14CQ5TAP6 766 aaKnown RBP20.04■□□□□ 0.8
EWSR1-221ENST00000610553 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 MRFAP1L1Q96HT8 127 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 GOLPH3LQ9H4A5 285 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 SALL1Q9NSC2 1324 aa20.04■□□□□ 0.8
EWSR1-221ENST00000610553 KDM4FA0A1W2PPD8 638 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 PTPDC1A2A3K4 754 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 TNNT1P13805 278 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 PHKG2P15735 406 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 CBX1P83916 185 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 CEBPZQ03701 1054 aaKnown RBP20.03■□□□□ 0.8
EWSR1-221ENST00000610553 SNW1Q13573 536 aaKnown RBP20.03■□□□□ 0.8
EWSR1-221ENST00000610553 FTOQ9C0B1 505 aaKnown RBP eCLIP20.03■□□□□ 0.8
EWSR1-221ENST00000610553 CASP7P55210 303 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 FGD1P98174 961 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 LMOD2Q6P5Q4 547 aa20.03■□□□□ 0.8
EWSR1-221ENST00000610553 CCAR1Q8IX12 1150 aaKnown RBP20.03■□□□□ 0.8
EWSR1-221ENST00000610553 GOLGA6L19H0YKK7 550 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 RAPGEF4Q8WZA2 1011 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 DSCC1Q9BVC3 393 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 KIF1AQ12756 1690 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
EWSR1-221ENST00000610553 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.79
EWSR1-221ENST00000610553 ATL3Q6DD88 541 aa20.02■□□□□ 0.79
EWSR1-221ENST00000610553 LRRC8AQ8IWT6 810 aa20.02■□□□□ 0.79
EWSR1-221ENST00000610553 USP28Q96RU2 1077 aa20.02■□□□□ 0.79
EWSR1-221ENST00000610553 C19orf44Q9H6X5 657 aa20.02■□□□□ 0.79
EWSR1-221ENST00000610553 PAXBP1Q9Y5B6 917 aa20.02■□□□□ 0.79
EWSR1-221ENST00000610553 MEGF6O75095 1541 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 SNRPA1P09661 255 aaKnown RBP20.01■□□□□ 0.79
EWSR1-221ENST00000610553 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
EWSR1-221ENST00000610553 ENGASEQ8NFI3 743 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 MST1RQ04912 1400 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 GLI3P10071 1580 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 A0A087WZG4 1122 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 APOBRQ0VD83 1088 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 HELLSQ9NRZ9 838 aa20.01■□□□□ 0.79
EWSR1-221ENST00000610553 ABCC6O95255 1503 aa20■□□□□ 0.79
EWSR1-221ENST00000610553 RBM6P78332 1123 aaKnown RBP20■□□□□ 0.79
EWSR1-221ENST00000610553 NEMFO60524 1076 aa19.99■□□□□ 0.79
EWSR1-221ENST00000610553 U2AF2P26368 475 aaKnown RBP eCLIP19.99■□□□□ 0.794e-14■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms