RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 RRP1P56182 461 aaKnown RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 INHBEP58166 350 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 SLC5A9Q2M3M2 681 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 TSNAXIP1Q2TAA8 658 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 CENPQQ7L2Z9 268 aaPredicted RBP5.47□□□□□ -1.53
HDDC2-208ENST00000609021 FAM76AQ8TAV0 307 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 PDLIM2Q96JY6 352 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ATG3Q9NT62 314 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 ATP8A1Q9Y2Q0 1164 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 MYOM1P52179 1685 aa5.47□□□□□ -1.53
HDDC2-208ENST00000609021 MYO3AQ8NEV4 1616 aa5.46□□□□□ -1.53
HDDC2-208ENST00000609021 ZNF24P17028 368 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 USP4Q13107 963 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 TSR1Q2NL82 804 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 OLFML1Q6UWY5 402 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 OTUD6AQ7L8S5 288 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 CEP57L1Q8IYX8 460 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 C3orf20Q8ND61 904 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 TCP11Q8WWU5 503 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MMADHCQ9H3L0 296 aaPredicted RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 ANTXR1Q9H6X2 564 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MADDQ8WXG6 1647 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 PREX1Q8TCU6 1659 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 TRAPPC8Q9Y2L5 1435 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 CTIFO43310 598 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MYL1P05976 194 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MSL3P1P0C860 447 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 GBP2P32456 591 aaPredicted RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 ACTN2P35609 894 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 HDLBPQ00341 1268 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 POU5F1Q01860 360 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MPP3Q13368 585 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 KRT72Q14CN4 511 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 MAP7D1Q3KQU3 841 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 GJC2Q5T442 439 aaPredicted RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 ATP11CQ8NB49 1132 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 USP33Q8TEY7 942 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 EZH1Q92800 747 aaPredicted RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 DNAI2Q9GZS0 605 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 CLIP2Q9UDT6 1046 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 TSPOAP1O95153 1857 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 SOS1Q07889 1333 aaPredicted RBP5.46□□□□□ -1.54
HDDC2-208ENST00000609021 CCDC141Q6ZP82 1450 aa5.46□□□□□ -1.54
HDDC2-208ENST00000609021 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 CYP11B2P19099 503 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 IBSPP21815 317 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 IQCB1Q15051 598 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 ANKRD45Q5TZF3 282 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 CAVIN1Q6NZI2 390 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TMC6Q7Z403 805 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TADA2BQ86TJ2 420 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 CHCHD4Q8N4Q1 142 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PMM1Q92871 262 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 DHRS1Q96LJ7 313 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 DUSP9Q99956 384 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TSGA10Q9BZW7 698 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PHACTR1Q9C0D0 580 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 LMCD1Q9NZU5 365 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 SEL1LQ9UBV2 794 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 CIZ1Q9ULV3 898 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PLEKHG2Q9H7P9 1386 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 RTEL1-TNFRSF6BF6WH68 1400 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 SETD5Q9C0A6 1442 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 DUOX2Q9NRD8 1548 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 SMTNL1A8MU46 457 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 KIF3BO15066 747 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 KIAA0754O94854 1291 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 EZRP15311 586 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 MCCD1P59942 119 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 FXNQ16595 210 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 KIAA0753Q2KHM9 967 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TMCO3Q6UWJ1 677 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PARD3BQ8TEW8 1205 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TBC1D2Q9BYX2 928 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TAOK3Q9H2K8 898 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PDRG1Q9NUG6 133 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 RGL1Q9NZL6 768 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 C6orf203Q9P0P8 240 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 MKRN1Q9UHC7 482 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 N6AMT1Q9Y5N5 214 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 ZNF644Q9H582 1327 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 COL17A1Q9UMD9 1497 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 FAM135AQ9P2D6 1515 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 ZSCAN9O15535 394 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 APLP1P51693 650 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 EIF5P55010 431 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 GRIK3Q13003 919 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 SLMAPQ14BN4 828 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 KLHL40Q2TBA0 621 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 NAA16Q6N069 864 aaPredicted RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 MYO1HQ8N1T3 1032 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 PAF1Q8N7H5 531 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 FAM81AQ8TBF8 368 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 NEK9Q8TD19 979 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 VMP1Q96GC9 406 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 TRMT1Q9NXH9 659 aaKnown RBP5.45□□□□□ -1.54
HDDC2-208ENST00000609021 RCAN3Q9UKA8 241 aa5.45□□□□□ -1.54
HDDC2-208ENST00000609021 EFCAB6Q5THR3 1501 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms