RNA–Protein interactions for RNA: ENST00000607866.1

ITM2B-204, Transcript of integral membrane protein 2B, humanhuman

TSL 3

Gene ITM2B, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-204ENST00000607866 TM4SF1P30408 202 aa8.03□□□□□ -1.12
ITM2B-204ENST00000607866 SLC39A6Q13433 755 aa8.03□□□□□ -1.12
ITM2B-204ENST00000607866 DALRD3Q5D0E6 543 aaKnown RBP8.03□□□□□ -1.12
ITM2B-204ENST00000607866 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
ITM2B-204ENST00000607866 TSC1Q92574 1164 aa8.03□□□□□ -1.12
ITM2B-204ENST00000607866 VRTNQ9H8Y1 702 aa8.03□□□□□ -1.12
ITM2B-204ENST00000607866 USPL1Q5W0Q7 1092 aa8.02□□□□□ -1.13
ITM2B-204ENST00000607866 HELBQ8NG08 1087 aaPredicted RBP8.02□□□□□ -1.13
ITM2B-204ENST00000607866 NARFQ9UHQ1 456 aa8.02□□□□□ -1.13
ITM2B-204ENST00000607866 ZBTB1Q9Y2K1 713 aa8.02□□□□□ -1.13
ITM2B-204ENST00000607866 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
ITM2B-204ENST00000607866 NRXN2Q9P2S2 1712 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 TOMM70O94826 608 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 STARD3NLO95772 234 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 NFIXQ14938 502 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 TTC5Q8N0Z6 440 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 GAS2L2Q8NHY3 880 aa8.01□□□□□ -1.13
ITM2B-204ENST00000607866 MAFBQ9Y5Q3 323 aaPredicted RBP8.01□□□□□ -1.13
ITM2B-204ENST00000607866 SBF1O95248 1867 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 SIPA1L3O60292 1781 aaPredicted RBP8□□□□□ -1.13
ITM2B-204ENST00000607866 GNAT3A8MTJ3 354 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 RIMBP2O15034 1052 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 U2SURPO15042 1029 aaKnown RBP8□□□□□ -1.13
ITM2B-204ENST00000607866 CHRNA5P30532 468 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 EIF5P55010 431 aaKnown RBP8□□□□□ -1.13
ITM2B-204ENST00000607866 NR6A1Q15406 480 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 SWT1Q5T5J6 900 aaKnown RBP8□□□□□ -1.13
ITM2B-204ENST00000607866 LHX8Q68G74 356 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 ZNF790Q6PG37 636 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 TBC1D9Q6ZT07 1266 aa8□□□□□ -1.13
ITM2B-204ENST00000607866 DLEC1Q9Y238 1755 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 A0A087WZG4 1122 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 CANXP27824 592 aaKnown RBP7.99□□□□□ -1.13
ITM2B-204ENST00000607866 SOX11P35716 441 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 APLP1P51693 650 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 TEFQ10587 303 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 CCDC27Q2M243 656 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 MAMSTRQ6ZN01 415 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 SND1Q7KZF4 910 aaKnown RBP eCLIP7.99□□□□□ -1.131e-10■■■■■ 36.1
ITM2B-204ENST00000607866 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 SYMPKQ92797 1274 aaKnown RBP7.99□□□□□ -1.13
ITM2B-204ENST00000607866 ZNF496Q96IT1 587 aaPredicted RBP7.99□□□□□ -1.13
ITM2B-204ENST00000607866 TEX13AQ9BXU3 409 aaPredicted RBP7.99□□□□□ -1.13
ITM2B-204ENST00000607866 NMRK2Q9NPI5 230 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 SCUBE2Q9NQ36 999 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 KDM2BQ8NHM5 1336 aa7.99□□□□□ -1.13
ITM2B-204ENST00000607866 ZC3H4Q9UPT8 1303 aaKnown RBP7.99□□□□□ -1.13
ITM2B-204ENST00000607866 HEG1Q9ULI3 1381 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 IGSF3O75054 1194 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 SERPINB2P05120 415 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 CNGB1Q14028 1251 aaPredicted RBP7.98□□□□□ -1.13
ITM2B-204ENST00000607866 SLF2Q8IX21 1173 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 RNF181Q9P0P0 153 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 SCN7AQ01118 1682 aa7.98□□□□□ -1.13
ITM2B-204ENST00000607866 E9PSI1 815 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 H0YIN7 160 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 PRKAR2BP31323 418 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 IL6STP40189 918 aaPredicted RBP7.97□□□□□ -1.13
ITM2B-204ENST00000607866 FUT2Q10981 343 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 SEMA3FQ13275 785 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 C16orf71Q8IYS4 520 aaPredicted RBP7.97□□□□□ -1.13
ITM2B-204ENST00000607866 TTLL6Q8N841 843 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 PHACTR3Q96KR7 559 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 TNRC6CQ9HCJ0 1690 aaKnown RBP7.97□□□□□ -1.13
ITM2B-204ENST00000607866 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
ITM2B-204ENST00000607866 BTBD11A6QL63 1104 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 LMNB1P20700 586 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 FSTL1Q12841 308 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 IFFO2Q5TF58 517 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 TBC1D9BQ66K14 1250 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 BICDL1Q6ZP65 573 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 C2CD5Q86YS7 1000 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 KCNK17Q96T54 332 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 ZBED2Q9BTP6 218 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 BRIP1Q9BX63 1249 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 PDZRN3Q9UPQ7 1066 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 NUDCQ9Y266 331 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 ANKRD31Q8N7Z5 1873 aa7.96□□□□□ -1.14
ITM2B-204ENST00000607866 ATP9BO43861 1147 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 PDE6BP35913 854 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 RASSF7Q02833 373 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 PRR5LQ6MZQ0 368 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 OTUD5Q96G74 571 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 GNEQ9Y223 722 aaKnown RBP7.95□□□□□ -1.14
ITM2B-204ENST00000607866 WDR90Q96KV7 1748 aa7.95□□□□□ -1.14
ITM2B-204ENST00000607866 BCORQ6W2J9 1755 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 CCDC88AQ3V6T2 1871 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 GLTPD2A6NH11 291 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 CAMTA2O94983 1202 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 A1BGP04217 495 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 U2AF1L5P0DN76 240 aaPredicted RBP7.94□□□□□ -1.14
ITM2B-204ENST00000607866 PPP2R1AP30153 589 aa7.94□□□□□ -1.14
ITM2B-204ENST00000607866 U2AF1Q01081 240 aaKnown RBP eCLIP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms