RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HNRNPUQ00839 825 aaKnown RBP eCLIP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 PSMD2Q13200 908 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 Q3C1V9 767 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 ZCCHC8Q6NZY4 707 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 ACRBPQ8NEB7 543 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 IFT122Q9HBG6 1241 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CNTLNQ9NXG0 1405 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 C6orf229H3BNL8 230 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CBFA2T2O43439 604 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 FLT3P36888 993 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 NBPF10Q6P3W6 841 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 MKL1Q969V6 931 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CCDC34Q96HJ3 373 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 ENAMQ9NRM1 1142 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CWC25Q9NXE8 425 aaPredicted RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CFAP99D6REC4 459 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 PES1O00541 588 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 TBX3O15119 743 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 FDX1P10109 184 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CDC27P30260 824 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 RBL2Q08999 1139 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CHPFQ8IZ52 775 aa6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 CCDC47Q96A33 483 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 RNPC3Q96LT9 517 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 NOL7Q9UMY1 257 aaKnown RBP6.02□□□□□ -1.45
SPTBN1-206ENST00000602898 K7ELQ4 463 aaPredicted RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 TLL1O43897 1013 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 XRCC6P12956 609 aaKnown RBP eCLIP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 ADD2P35612 726 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 GCGRP47871 477 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 NFX1Q12986 1120 aaKnown RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 RNF217Q8TC41 542 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 TMC1Q8TDI8 760 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 ARNT2Q9HBZ2 717 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 PRDM9Q9NQV7 894 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 MRPS23Q9Y3D9 190 aaKnown RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 CEP83Q9Y592 693 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 POTEMA6NI47 508 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 DNAJC21Q5F1R6 531 aaKnown RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 LARP1BQ659C4 914 aaKnown RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 KIAA1958Q8N8K9 716 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 VPS37AQ8NEZ2 397 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 MYRIPQ8NFW9 859 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 ERP27Q96DN0 273 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 AGBL1Q96MI9 1066 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 BRINP2Q9C0B6 783 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 SLC27A5Q9Y2P5 690 aa6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 SETD1AO15047 1707 aaKnown RBP6.01□□□□□ -1.45
SPTBN1-206ENST00000602898 FRAT2O75474 233 aaPredicted RBP6□□□□□ -1.45
SPTBN1-206ENST00000602898 HCLS1P14317 486 aaPredicted RBP6□□□□□ -1.45
SPTBN1-206ENST00000602898 SSR1P43307 286 aaKnown RBP6□□□□□ -1.45
SPTBN1-206ENST00000602898 SLC4A10Q6U841 1118 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 SYNPO2Q9UMS6 1093 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 NOVA2Q9UNW9 492 aaKnown RBP6□□□□□ -1.45
SPTBN1-206ENST00000602898 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 ERBB4Q15303 1308 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 TULP2O00295 520 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 LGR5O75473 907 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 PDE3BQ13370 1112 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 DALRD3Q5D0E6 543 aaKnown RBP6□□□□□ -1.45
SPTBN1-206ENST00000602898 CCDC89Q8N998 374 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 RUNDC1Q96C34 613 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 CHMP4CQ96CF2 233 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 TAGLN3Q9UI15 199 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 HPS5Q9UPZ3 1129 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 DAAM1Q9Y4D1 1078 aa6□□□□□ -1.45
SPTBN1-206ENST00000602898 PTPRKQ15262 1439 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 UHRF1BP1Q6BDS2 1440 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 CCDC66A2RUB6 948 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 HRO43593 1189 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 PPFIA3O75145 1194 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 P4HBP07237 508 aaKnown RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 MAPRE1Q15691 268 aaKnown RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 ZKSCAN8Q15776 578 aaPredicted RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 INO80DQ53TQ3 878 aaPredicted RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 ESCO1Q5FWF5 840 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 SULF1Q8IWU6 871 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 KMT5AQ9NQR1 393 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 RBM28Q9NW13 759 aaKnown RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 TCOF1Q13428 1488 aaKnown RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 NAP1L1P55209 391 aaKnown RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 RAPGEF1Q13905 1077 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 NFE2L2Q16236 605 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 KSR2Q6VAB6 950 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 HDGFL2Q7Z4V5 671 aaPredicted RBP5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 RELL1Q8IUW5 271 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 MRGBPQ9NV56 204 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 CLIC5Q9NZA1 410 aa5.99□□□□□ -1.45
SPTBN1-206ENST00000602898 BICDL2A1A5D9 508 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 ECEL1O95672 775 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 SCGB1D2O95969 90 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 VIL1P09327 827 aaKnown RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 RASA1P20936 1047 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 MAN1A1P33908 653 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 KCNJ4P48050 445 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 MRE11P49959 708 aa5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 CRTC2Q53ET0 693 aaPredicted RBP5.98□□□□□ -1.45
SPTBN1-206ENST00000602898 KANK4Q5T7N3 995 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms