RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 MYL6BP14649 208 aa19.23■□□□□ 0.67
TRIM11-205ENST00000602308 PTPN12Q05209 780 aaKnown RBP19.23■□□□□ 0.67
TRIM11-205ENST00000602308 PRO3102Q9H379 93 aa19.23■□□□□ 0.67
TRIM11-205ENST00000602308 NSFL1CQ9UNZ2 370 aaKnown RBP19.23■□□□□ 0.67
TRIM11-205ENST00000602308 LAMA3Q16787 3333 aa19.23■□□□□ 0.67
TRIM11-205ENST00000602308 PITPNM2Q9BZ72 1349 aa19.23■□□□□ 0.67
TRIM11-205ENST00000602308 ERO1AQ96HE7 468 aa19.22■□□□□ 0.67
TRIM11-205ENST00000602308 ZNF609O15014 1411 aa19.22■□□□□ 0.67
TRIM11-205ENST00000602308 C6orf229H3BNL8 230 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 TAF1P21675 1872 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 SPRYD7Q5W111 196 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 IFNL1Q8IU54 200 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 SCN9AQ15858 1988 aa19.21■□□□□ 0.67
TRIM11-205ENST00000602308 LAMB2P55268 1798 aa19.2■□□□□ 0.66
TRIM11-205ENST00000602308 DCTN1Q14203 1278 aa19.2■□□□□ 0.66
TRIM11-205ENST00000602308 TMC4Q7Z404 712 aa19.2■□□□□ 0.66
TRIM11-205ENST00000602308 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
TRIM11-205ENST00000602308 SOX1O00570 391 aaPredicted RBP19.19■□□□□ 0.66
TRIM11-205ENST00000602308 GPSM2P81274 684 aa19.19■□□□□ 0.66
TRIM11-205ENST00000602308 TCIRG1Q13488 830 aa19.19■□□□□ 0.66
TRIM11-205ENST00000602308 MYOZ2Q9NPC6 264 aa19.19■□□□□ 0.66
TRIM11-205ENST00000602308 COL3A1P02461 1466 aaPredicted RBP19.19■□□□□ 0.66
TRIM11-205ENST00000602308 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
TRIM11-205ENST00000602308 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
TRIM11-205ENST00000602308 UNC80Q8N2C7 3258 aa19.18■□□□□ 0.66
TRIM11-205ENST00000602308 IGF2BP3O00425 579 aaKnown RBP eCLIP19.18■□□□□ 0.66
TRIM11-205ENST00000602308 SLC4A8Q2Y0W8 1093 aa19.18■□□□□ 0.66
TRIM11-205ENST00000602308 AGBL3Q8NEM8 1001 aa19.18■□□□□ 0.66
TRIM11-205ENST00000602308 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
TRIM11-205ENST00000602308 RSBN1LQ6PCB5 846 aaPredicted RBP19.17■□□□□ 0.66
TRIM11-205ENST00000602308 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
TRIM11-205ENST00000602308 MANSC4A6NHS7 340 aaPredicted RBP19.16■□□□□ 0.66
TRIM11-205ENST00000602308 WTIPA6NIX2 430 aaPredicted RBP19.16■□□□□ 0.66
TRIM11-205ENST00000602308 INHBEP58166 350 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 PRKG1Q13976 671 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 LDLRAD1Q5T700 205 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 DPF3Q92784 378 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 CELF1Q92879 486 aaKnown RBP19.16■□□□□ 0.66
TRIM11-205ENST00000602308 LRCH3Q96II8 777 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 GMLQ99445 158 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 EYA3Q99504 573 aa19.16■□□□□ 0.66
TRIM11-205ENST00000602308 COL25A1Q9BXS0 654 aaPredicted RBP19.16■□□□□ 0.66
TRIM11-205ENST00000602308 MYCP01106 439 aaPredicted RBP19.15■□□□□ 0.66
TRIM11-205ENST00000602308 CRHR2Q13324 411 aa19.15■□□□□ 0.66
TRIM11-205ENST00000602308 TAF7Q15545 349 aaPredicted RBP19.15■□□□□ 0.66
TRIM11-205ENST00000602308 NBPF9Q3BBW0 867 aa19.15■□□□□ 0.66
TRIM11-205ENST00000602308 TBC1D16Q8TBP0 767 aa19.15■□□□□ 0.66
TRIM11-205ENST00000602308 RSPH6AQ9H0K4 717 aa19.15■□□□□ 0.66
TRIM11-205ENST00000602308 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 NF2P35240 595 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 SP3Q02447 781 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 SLC9C1Q4G0N8 1177 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 NBPF11Q86T75 865 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 NECTIN2Q92692 538 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 PTCH2Q9Y6C5 1203 aa19.14■□□□□ 0.65
TRIM11-205ENST00000602308 DDX60Q8IY21 1712 aaKnown RBP19.14■□□□□ 0.65
TRIM11-205ENST00000602308 NLRP10Q86W26 655 aa19.13■□□□□ 0.65
TRIM11-205ENST00000602308 FZD1Q9UP38 647 aa19.13■□□□□ 0.65
TRIM11-205ENST00000602308 COL4A1P02462 1669 aa19.12■□□□□ 0.65
TRIM11-205ENST00000602308 LRP10Q7Z4F1 713 aa19.12■□□□□ 0.65
TRIM11-205ENST00000602308 THUMPD2Q9BTF0 503 aaKnown RBP19.12■□□□□ 0.65
TRIM11-205ENST00000602308 ZC3H12CQ9C0D7 883 aaKnown RBP19.12■□□□□ 0.65
TRIM11-205ENST00000602308 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
TRIM11-205ENST00000602308 TRMT112Q9UI30 125 aaKnown RBP19.11■□□□□ 0.65
TRIM11-205ENST00000602308 ANGEL1Q9UNK9 670 aaKnown RBP19.11■□□□□ 0.65
TRIM11-205ENST00000602308 EIF4A1P60842 406 aaKnown RBP19.1■□□□□ 0.65
TRIM11-205ENST00000602308 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.1■□□□□ 0.65
TRIM11-205ENST00000602308 SH3TC1Q8TE82 1336 aa19.09■□□□□ 0.65
TRIM11-205ENST00000602308 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
TRIM11-205ENST00000602308 SHISA4Q96DD7 197 aa19.09■□□□□ 0.65
TRIM11-205ENST00000602308 SLC10A4Q96EP9 437 aa19.09■□□□□ 0.65
TRIM11-205ENST00000602308 WNK4Q96J92 1243 aa19.09■□□□□ 0.65
TRIM11-205ENST00000602308 G3V3G9 751 aa19.08■□□□□ 0.64
TRIM11-205ENST00000602308 WNT10BO00744 389 aa19.08■□□□□ 0.64
TRIM11-205ENST00000602308 ZBTB48P10074 688 aaPredicted RBP19.08■□□□□ 0.64
TRIM11-205ENST00000602308 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.64
TRIM11-205ENST00000602308 DCAF8Q5TAQ9 597 aa19.08■□□□□ 0.64
TRIM11-205ENST00000602308 VCANP13611 3396 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 A0A1W2PPC1 479 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
TRIM11-205ENST00000602308 PDIA6Q15084 440 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 CLMNQ96JQ2 1002 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 PTPN18Q99952 460 aa19.07■□□□□ 0.64
TRIM11-205ENST00000602308 HSPA5P11021 654 aaKnown RBP19.06■□□□□ 0.64
TRIM11-205ENST00000602308 SF3B3Q15393 1217 aaKnown RBP19.06■□□□□ 0.64
TRIM11-205ENST00000602308 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
TRIM11-205ENST00000602308 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
TRIM11-205ENST00000602308 UFL1O94874 794 aa19.05■□□□□ 0.64
TRIM11-205ENST00000602308 PROSER3Q2NL68 480 aa19.05■□□□□ 0.64
TRIM11-205ENST00000602308 USP17L3A6NCW0 530 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 USP17L4A6NCW7 530 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 ZBTB7BO15156 539 aaPredicted RBP19.04■□□□□ 0.64
TRIM11-205ENST00000602308 ANXA1P04083 346 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 GJA5P36382 358 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 MAP3K11Q16584 847 aa19.04■□□□□ 0.64
TRIM11-205ENST00000602308 OTUD7BQ6GQQ9 843 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms