RNA–Protein interactions for RNA: ENST00000601769.5

CD22-231, Transcript of CD22 molecule, human

TSL 2

Gene CD22, Length 3,060 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD22-231	ENST00000601769	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
CD22-231	ENST00000601769	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.76	□□□□□ -0.37
CD22-231	ENST00000601769	MED23	Q9ULK4	1368 aa		12.76	□□□□□ -0.37
CD22-231	ENST00000601769	CCDC171	Q6TFL3	1326 aa		12.76	□□□□□ -0.37
CD22-231	ENST00000601769	AMIGO3	Q86WK7	504 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	SEC62	Q99442	399 aa	Known RBP	12.75	□□□□□ -0.37
CD22-231	ENST00000601769	RIPOR2	Q9Y4F9	1068 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	AKAP11	Q9UKA4	1901 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	NTSR2	O95665	410 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	SH3TC1	Q8TE82	1336 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	ANKRD18B	A2A2Z9	1011 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	GOLIM4	O00461	696 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	EPB41L2	O43491	1005 aa	Known RBP	12.75	□□□□□ -0.37
CD22-231	ENST00000601769	HSP90B1	P14625	803 aa	Known RBP	12.75	□□□□□ -0.37
CD22-231	ENST00000601769	CPA1	P15085	419 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	LDHAL6A	Q6ZMR3	332 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	CCDC129	Q6ZRS4	1044 aa		12.75	□□□□□ -0.37
CD22-231	ENST00000601769	ZGPAT	Q8N5A5	531 aa	Known RBP	12.75	□□□□□ -0.37
CD22-231	ENST00000601769	UTP14A	Q9BVJ6	771 aa	Known RBP	12.75	□□□□□ -0.37
CD22-231	ENST00000601769	PRPF40B	Q6NWY9	871 aa	Known RBP	12.74	□□□□□ -0.37
CD22-231	ENST00000601769	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
CD22-231	ENST00000601769	XAGE2	Q96GT9	111 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	HIP1	O00291	1037 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	DEK	P35659	375 aa	Known RBP	12.74	□□□□□ -0.37
CD22-231	ENST00000601769	COL9A3	Q14050	684 aa	Predicted RBP	12.74	□□□□□ -0.37
CD22-231	ENST00000601769	SCARF1	Q14162	830 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	METTL24	Q5JXM2	366 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	SEC31B	Q9NQW1	1179 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	SNRK	Q9NRH2	765 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	RBM8A	Q9Y5S9	174 aa	Known RBP	12.74	□□□□□ -0.37
CD22-231	ENST00000601769	MYH7	P12883	1935 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	C4A	P0C0L4	1744 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	C4B	P0C0L5	1744 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	CNTNAP4	Q9C0A0	1308 aa		12.74	□□□□□ -0.37
CD22-231	ENST00000601769	ADCK5	Q3MIX3	580 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	SEPT12	Q8IYM1	358 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	NAP1L5	Q96NT1	182 aa	Predicted RBP	12.73	□□□□□ -0.37
CD22-231	ENST00000601769	PAG1	Q9NWQ8	432 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	TAF6L	Q9Y6J9	622 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	ARAP2	Q8WZ64	1704 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	IFIT1	P09914	478 aa	Known RBP	12.73	□□□□□ -0.37
CD22-231	ENST00000601769	VGLL2	Q8N8G2	317 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	CNNM1	Q9NRU3	951 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	SRP68	Q9UHB9	627 aa	Known RBP	12.73	□□□□□ -0.37
CD22-231	ENST00000601769	NECTIN1	Q15223	517 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	PI16	Q6UXB8	463 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	KBTBD3	Q8NAB2	608 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	TMX3	Q96JJ7	454 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769	BCL2L12	Q9HB09	334 aa		12.73	□□□□□ -0.37
CD22-231	ENST00000601769		A0A1B0GUL6	1792 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	ATP2B3	Q16720	1220 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	PARP10	Q53GL7	1025 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	BICDL1	Q6ZP65	573 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	HELB	Q8NG08	1087 aa	Predicted RBP	12.72	□□□□□ -0.37
CD22-231	ENST00000601769	MAP4K1	Q92918	833 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	CCNL1	Q9UK58	526 aa	Predicted RBP	12.72	□□□□□ -0.37
CD22-231	ENST00000601769	TRPC5	Q9UL62	973 aa	Predicted RBP	12.72	□□□□□ -0.37
CD22-231	ENST00000601769	C3orf67	Q6ZVT6	689 aa		12.72	□□□□□ -0.37
CD22-231	ENST00000601769	LARP6	Q9BRS8	491 aa	Known RBP	12.72	□□□□□ -0.37
CD22-231	ENST00000601769	SNAP23	O00161	211 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	ONECUT3	O60422	494 aa	Predicted RBP	12.71	□□□□□ -0.37
CD22-231	ENST00000601769	SSFA2	P28290	1259 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	PKP1	Q13835	747 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	TNPO1	Q92973	898 aa	Known RBP	12.71	□□□□□ -0.37
CD22-231	ENST00000601769	AKAP2	Q9Y2D5	859 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	RFX7	Q2KHR2	1363 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	COL24A1	Q17RW2	1714 aa		12.71	□□□□□ -0.37
CD22-231	ENST00000601769	GNPAT	O15228	680 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	TAF5L	O75529	589 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	RAB3GAP1	Q15042	981 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	TTC39A	Q5SRH9	613 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	TBC1D9B	Q66K14	1250 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	CREB3L3	Q68CJ9	461 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	TTC14	Q96N46	770 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.71	□□□□□ -0.38
CD22-231	ENST00000601769	LAMA4	Q16363	1823 aa		12.71	□□□□□ -0.38
CD22-231	ENST00000601769	ERFE	Q4G0M1	354 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	GORAB	Q5T7V8	394 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	USPL1	Q5W0Q7	1092 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	KCNB2	Q92953	911 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	SLC27A2	O14975	620 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	CAST	P20810	708 aa	Known RBP	12.7	□□□□□ -0.38
CD22-231	ENST00000601769	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
CD22-231	ENST00000601769	JAKMIP1	Q96N16	626 aa	Known RBP	12.7	□□□□□ -0.38
CD22-231	ENST00000601769	QTRT2	Q9H974	415 aa	Known RBP	12.7	□□□□□ -0.38
CD22-231	ENST00000601769	ZNF652	Q9Y2D9	606 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	KCNJ4	P48050	445 aa		12.7	□□□□□ -0.38
CD22-231	ENST00000601769	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.7	□□□□□ -0.38
CD22-231	ENST00000601769	RPS6KA4	O75676	772 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	MCM4	P33991	863 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	ZAP70	P43403	619 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	AK2	P54819	239 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	CCDC158	Q5M9N0	1113 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	AK7	Q96M32	723 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	ABCC12	Q96J65	1359 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	PDE8B	O95263	885 aa		12.69	□□□□□ -0.38
CD22-231	ENST00000601769	MCAM	P43121	646 aa		12.68	□□□□□ -0.38
CD22-231	ENST00000601769	RC3H1	Q5TC82	1133 aa	Known RBP	12.68	□□□□□ -0.38
CD22-231	ENST00000601769	CLEC4G	Q6UXB4	293 aa		12.68	□□□□□ -0.38
CD22-231	ENST00000601769	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms