RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TIMM10P62072 90 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 VGLL2Q8N8G2 317 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 AKAP2Q9Y2D5 859 aa18.56■□□□□ 0.56
VRK3-207ENST00000594092 A0A1B0GUL7 405 aa18.55■□□□□ 0.56
VRK3-207ENST00000594092 TRIM6-TRIM34B2RNG4 842 aa18.55■□□□□ 0.56
VRK3-207ENST00000594092 UPF2Q9HAU5 1272 aaKnown RBP18.55■□□□□ 0.56
VRK3-207ENST00000594092 QSER1Q2KHR3 1735 aa18.55■□□□□ 0.56
VRK3-207ENST00000594092 MROH5Q6ZUA9 1318 aa18.55■□□□□ 0.56
VRK3-207ENST00000594092 ST5P78524 1137 aa18.54■□□□□ 0.56
VRK3-207ENST00000594092 SPEF2Q9C093 1822 aa18.54■□□□□ 0.56
VRK3-207ENST00000594092 MAP4K4O95819 1239 aaPredicted RBP18.53■□□□□ 0.56
VRK3-207ENST00000594092 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
VRK3-207ENST00000594092 RILPL2Q969X0 211 aa18.53■□□□□ 0.56
VRK3-207ENST00000594092 TAF1P21675 1872 aa18.53■□□□□ 0.56
VRK3-207ENST00000594092 PDE8BO95263 885 aa18.53■□□□□ 0.56
VRK3-207ENST00000594092 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
VRK3-207ENST00000594092 ATP5JP18859 108 aa18.52■□□□□ 0.56
VRK3-207ENST00000594092 ATP2B3Q16720 1220 aa18.52■□□□□ 0.56
VRK3-207ENST00000594092 MSL1Q68DK7 614 aa18.52■□□□□ 0.56
VRK3-207ENST00000594092 MMP10P09238 476 aa18.51■□□□□ 0.55
VRK3-207ENST00000594092 HELBQ8NG08 1087 aaPredicted RBP18.51■□□□□ 0.55
VRK3-207ENST00000594092 BOLA2Q9H3K6 86 aa18.51■□□□□ 0.55
VRK3-207ENST00000594092 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
VRK3-207ENST00000594092 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
VRK3-207ENST00000594092 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
VRK3-207ENST00000594092 CNTROBQ8N137 903 aa18.51■□□□□ 0.55
VRK3-207ENST00000594092 XAGE2Q96GT9 111 aa18.51■□□□□ 0.55
VRK3-207ENST00000594092 ADORA1P30542 326 aa18.5■□□□□ 0.55
VRK3-207ENST00000594092 RPS8P62241 208 aaKnown RBP18.5■□□□□ 0.55
VRK3-207ENST00000594092 FGFR2P21802 821 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
VRK3-207ENST00000594092 CHRNDQ07001 517 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 PUM3Q15397 648 aaKnown RBP18.49■□□□□ 0.55
VRK3-207ENST00000594092 CRY2Q49AN0 593 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 PARP3Q9Y6F1 533 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 AK9Q5TCS8 1911 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 TAF5LO75529 589 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
VRK3-207ENST00000594092 KLRG2A4D1S0 409 aaPredicted RBP18.48■□□□□ 0.55
VRK3-207ENST00000594092 EIF5BO60841 1220 aaKnown RBP18.48■□□□□ 0.55
VRK3-207ENST00000594092 CHMLP26374 656 aa18.48■□□□□ 0.55
VRK3-207ENST00000594092 LPIN2Q92539 896 aa18.48■□□□□ 0.55
VRK3-207ENST00000594092 EVI5LQ96CN4 794 aa18.48■□□□□ 0.55
VRK3-207ENST00000594092 GORABQ5T7V8 394 aa18.47■□□□□ 0.55
VRK3-207ENST00000594092 IPO9Q96P70 1041 aaKnown RBP18.47■□□□□ 0.55
VRK3-207ENST00000594092 HAUS7Q99871 368 aa18.47■□□□□ 0.55
VRK3-207ENST00000594092 MINPP1Q9UNW1 487 aa18.47■□□□□ 0.55
VRK3-207ENST00000594092 SNAP23O00161 211 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 GRAPQ13588 217 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 GRAPLQ8TC17 118 aaPredicted RBP18.46■□□□□ 0.55
VRK3-207ENST00000594092 RPGRQ92834 1020 aaKnown RBP18.46■□□□□ 0.55
VRK3-207ENST00000594092 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 BRIP1Q9BX63 1249 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 PDGFDQ9GZP0 370 aaPredicted RBP18.46■□□□□ 0.55
VRK3-207ENST00000594092 ANKRD31Q8N7Z5 1873 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.46■□□□□ 0.55
VRK3-207ENST00000594092 A0A1B0GUL6 1792 aa18.46■□□□□ 0.55
VRK3-207ENST00000594092 SLC5A1P13866 664 aa18.45■□□□□ 0.54
VRK3-207ENST00000594092 TTC39AQ5SRH9 613 aa18.45■□□□□ 0.54
VRK3-207ENST00000594092 NDUFB9Q9Y6M9 179 aa18.45■□□□□ 0.54
VRK3-207ENST00000594092 ARAP2Q8WZ64 1704 aa18.45■□□□□ 0.54
VRK3-207ENST00000594092 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
VRK3-207ENST00000594092 HOXA10P31260 410 aaPredicted RBP18.44■□□□□ 0.54
VRK3-207ENST00000594092 EDC3Q96F86 508 aaKnown RBP18.44■□□□□ 0.54
VRK3-207ENST00000594092 RBM17Q96I25 401 aaKnown RBP18.44■□□□□ 0.54
VRK3-207ENST00000594092 TBC1D32Q96NH3 1257 aa18.44■□□□□ 0.54
VRK3-207ENST00000594092 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
VRK3-207ENST00000594092 ESYT1Q9BSJ8 1104 aa18.43■□□□□ 0.54
VRK3-207ENST00000594092 UBE4AQ14139 1066 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 UPF1Q92900 1129 aaKnown RBP eCLIP18.42■□□□□ 0.54
VRK3-207ENST00000594092 ZNF512BQ96KM6 892 aaPredicted RBP18.42■□□□□ 0.54
VRK3-207ENST00000594092 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 PHKA1P46020 1223 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 SCARF1Q14162 830 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 CCDC102BQ68D86 513 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 FSD1Q9BTV5 496 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 ANKRD2Q9GZV1 360 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
VRK3-207ENST00000594092 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
VRK3-207ENST00000594092 PDE6BP35913 854 aa18.41■□□□□ 0.54
VRK3-207ENST00000594092 SLC16A10Q8TF71 515 aa18.41■□□□□ 0.54
VRK3-207ENST00000594092 GOLIM4O00461 696 aa18.4■□□□□ 0.54
VRK3-207ENST00000594092 SRGNP10124 158 aa18.4■□□□□ 0.54
VRK3-207ENST00000594092 ARID4AP29374 1257 aaPredicted RBP18.4■□□□□ 0.54
VRK3-207ENST00000594092 DIAPH3Q9NSV4 1193 aa18.4■□□□□ 0.54
VRK3-207ENST00000594092 BBOX1O75936 387 aa18.39■□□□□ 0.54
VRK3-207ENST00000594092 MCAMP43121 646 aa18.39■□□□□ 0.54
VRK3-207ENST00000594092 SLC51AQ86UW1 340 aa18.39■□□□□ 0.54
VRK3-207ENST00000594092 IL25Q9H293 177 aa18.39■□□□□ 0.54
VRK3-207ENST00000594092 SNRKQ9NRH2 765 aa18.39■□□□□ 0.54
VRK3-207ENST00000594092 HIP1O00291 1037 aa18.39■□□□□ 0.53
VRK3-207ENST00000594092 REC8O95072 547 aa18.39■□□□□ 0.53
VRK3-207ENST00000594092 UQCRFS1P1P0C7P4 283 aa18.39■□□□□ 0.53
VRK3-207ENST00000594092 KBTBD3Q8NAB2 608 aa18.39■□□□□ 0.53
VRK3-207ENST00000594092 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
VRK3-207ENST00000594092 AKAP11Q9UKA4 1901 aa18.38■□□□□ 0.53
VRK3-207ENST00000594092 COL11A2P13942 1736 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms