RNA–Protein interactions for RNA: ENST00000593330.1

SOX2-OT-219, SOX2 overlapping transcript, humanhuman

TSL 3

Gene SOX2-OT, Length 468 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-219ENST00000593330 CMTR1Q8N1G2 835 aaKnown RBP10.08□□□□□ -0.8
SOX2-OT-219ENST00000593330 PPP1R12CQ9BZL4 782 aa10.08□□□□□ -0.8
SOX2-OT-219ENST00000593330 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
SOX2-OT-219ENST00000593330 RGL4Q8IZJ4 473 aa10.07□□□□□ -0.8
SOX2-OT-219ENST00000593330 CALR3Q96L12 384 aaKnown RBP10.07□□□□□ -0.8
SOX2-OT-219ENST00000593330 KIAA1324LA8MWY0 1029 aaPredicted RBP10.06□□□□□ -0.8
SOX2-OT-219ENST00000593330 SETDB1Q15047 1291 aa10.06□□□□□ -0.8
SOX2-OT-219ENST00000593330 TREML1Q86YW5 311 aa10.06□□□□□ -0.8
SOX2-OT-219ENST00000593330 SPACA7Q96KW9 195 aa10.06□□□□□ -0.8
SOX2-OT-219ENST00000593330 FMNL2Q96PY5 1086 aa10.06□□□□□ -0.8
SOX2-OT-219ENST00000593330 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
SOX2-OT-219ENST00000593330 OPLAHO14841 1288 aa10.05□□□□□ -0.8
SOX2-OT-219ENST00000593330 ALX3O95076 343 aa10.05□□□□□ -0.8
SOX2-OT-219ENST00000593330 KRTAP19-1Q8IUB9 90 aa10.05□□□□□ -0.8
SOX2-OT-219ENST00000593330 NSUN5Q96P11 429 aaKnown RBP10.05□□□□□ -0.8
SOX2-OT-219ENST00000593330 J3QW42 95 aa10.04□□□□□ -0.8
SOX2-OT-219ENST00000593330 MMP20O60882 483 aa10.04□□□□□ -0.8
SOX2-OT-219ENST00000593330 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.04□□□□□ -0.8
SOX2-OT-219ENST00000593330 NLRP13Q86W25 1043 aa10.04□□□□□ -0.8
SOX2-OT-219ENST00000593330 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
SOX2-OT-219ENST00000593330 FAM117BQ6P1L5 589 aa10.03□□□□□ -0.8
SOX2-OT-219ENST00000593330 SMNDC1O75940 238 aaKnown RBP eCLIP10.02□□□□□ -0.81
SOX2-OT-219ENST00000593330 FNDC3AQ9Y2H6 1198 aaKnown RBP10.02□□□□□ -0.81
SOX2-OT-219ENST00000593330 BRD2P25440 801 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 LMOD1P29536 600 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 CD68P34810 354 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 GP2P55259 537 aaKnown RBP10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 FNBP4Q8N3X1 1017 aaPredicted RBP10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 PIK3R5Q8WYR1 880 aa10.01□□□□□ -0.81
SOX2-OT-219ENST00000593330 LGR5O75473 907 aa10□□□□□ -0.81
SOX2-OT-219ENST00000593330 HYAL2Q12891 473 aa10□□□□□ -0.81
SOX2-OT-219ENST00000593330 KLHL23Q8NBE8 558 aa10□□□□□ -0.81
SOX2-OT-219ENST00000593330 ARXQ96QS3 562 aa10□□□□□ -0.81
SOX2-OT-219ENST00000593330 KCNMB2Q9Y691 235 aa10□□□□□ -0.81
SOX2-OT-219ENST00000593330 NFIAQ12857 509 aa9.99□□□□□ -0.81
SOX2-OT-219ENST00000593330 UTP4Q969X6 686 aaKnown RBP9.99□□□□□ -0.81
SOX2-OT-219ENST00000593330 TRIM33Q9UPN9 1127 aa9.99□□□□□ -0.81
SOX2-OT-219ENST00000593330 SWI5Q1ZZU3 235 aa9.98□□□□□ -0.81
SOX2-OT-219ENST00000593330 ACAD11Q709F0 780 aa9.98□□□□□ -0.81
SOX2-OT-219ENST00000593330 AGGF1Q8N302 714 aaeCLIP9.98□□□□□ -0.81
SOX2-OT-219ENST00000593330 DBNDD2Q9BQY9 259 aa9.98□□□□□ -0.81
SOX2-OT-219ENST00000593330 LRFN2Q9ULH4 789 aa9.98□□□□□ -0.81
SOX2-OT-219ENST00000593330 TGFB1P01137 390 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 CDC27P30260 824 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 RNF43Q68DV7 783 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 OR13H1Q8NG92 308 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 KRTAP9-9Q9BYP9 154 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 KRTAP9-4Q9BYQ2 154 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 USP20Q9Y2K6 914 aa9.97□□□□□ -0.81
SOX2-OT-219ENST00000593330 UBAP1LF5GYI3 381 aa9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 COX20Q5RI15 118 aa9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 TTC39BQ5VTQ0 682 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 COL26A1Q96A83 441 aa9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 UBL7Q96S82 380 aaPredicted RBP9.96□□□□□ -0.82
SOX2-OT-219ENST00000593330 C16orf46Q6P387 395 aa9.95□□□□□ -0.82
SOX2-OT-219ENST00000593330 ZDHHC13Q8IUH4 622 aa9.95□□□□□ -0.82
SOX2-OT-219ENST00000593330 RNF114Q9Y508 228 aa9.95□□□□□ -0.82
SOX2-OT-219ENST00000593330 OAS3Q9Y6K5 1087 aaKnown RBP9.95□□□□□ -0.82
SOX2-OT-219ENST00000593330 LINC01387J3KSC0 135 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 RFX1P22670 979 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 SCNN1AP37088 669 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 DUOXA2Q1HG44 320 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 GIMAP7Q8NHV1 300 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 CLUAP1Q96AJ1 413 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 MYRFLQ96LU7 910 aa9.94□□□□□ -0.82
SOX2-OT-219ENST00000593330 SART1O43290 800 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 WNT11O96014 354 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 ANKRD34AQ69YU3 496 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 CLEC10AQ8IUN9 316 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 WNT8BQ93098 351 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 FAM46AQ96IP4 442 aaKnown RBP9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 C7orf69Q9H7B7 122 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 HIF3AQ9Y2N7 669 aa9.93□□□□□ -0.82
SOX2-OT-219ENST00000593330 A6NJR5 290 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 PTPRAP18433 802 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 SPINK2P20155 84 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 CABP4P57796 275 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 ARMC10Q8N2F6 343 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 GALNT11Q8NCW6 608 aa9.92□□□□□ -0.82
SOX2-OT-219ENST00000593330 ACIN1Q9UKV3 1341 aaKnown RBP9.91□□□□□ -0.82
SOX2-OT-219ENST00000593330 FSCN2O14926 492 aa9.91□□□□□ -0.82
SOX2-OT-219ENST00000593330 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
SOX2-OT-219ENST00000593330 DTX1Q86Y01 620 aa9.91□□□□□ -0.82
SOX2-OT-219ENST00000593330 LACRTQ9GZZ8 138 aa9.91□□□□□ -0.82
SOX2-OT-219ENST00000593330 TRIM42Q8IWZ5 723 aa9.9□□□□□ -0.82
SOX2-OT-219ENST00000593330 ETFBKMTQ8IXQ9 262 aa9.9□□□□□ -0.82
SOX2-OT-219ENST00000593330 FAM83CQ9BQN1 747 aa9.9□□□□□ -0.82
SOX2-OT-219ENST00000593330 SEC31BQ9NQW1 1179 aa9.9□□□□□ -0.82
SOX2-OT-219ENST00000593330 MED26O95402 600 aa9.89□□□□□ -0.83
SOX2-OT-219ENST00000593330 NOVA2Q9UNW9 492 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-219ENST00000593330 KRTAP4-8A0A0G2JLE6 195 aa9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 KIF4AO95239 1232 aa9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 PIP4K2BP78356 416 aa9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 NCAPG2Q86XI2 1143 aa9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 FAM20CQ8IXL6 584 aa9.88□□□□□ -0.83
SOX2-OT-219ENST00000593330 PBX4Q9BYU1 374 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms