RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 IFIT1P09914 478 aaKnown RBP14.39□□□□□ -0.11
NPC1-214ENST00000593280 PTH1RQ03431 593 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 CCDC158Q5M9N0 1113 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 TTC39AQ5SRH9 613 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 DDX46Q7L014 1031 aaKnown RBP14.39□□□□□ -0.11
NPC1-214ENST00000593280 KBTBD3Q8NAB2 608 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 QTRT2Q9H974 415 aaKnown RBP14.39□□□□□ -0.11
NPC1-214ENST00000593280 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 SNX14Q9Y5W7 946 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 C4AP0C0L4 1744 aa14.39□□□□□ -0.11
NPC1-214ENST00000593280 RTL9Q8NET4 1388 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 GOLIM4O00461 696 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 GNPATO15228 680 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 FRAT2O75474 233 aaPredicted RBP14.38□□□□□ -0.11
NPC1-214ENST00000593280 RPS6KA4O75676 772 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 ATP2B3Q16720 1220 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 TICAM2Q86XR7 235 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 XAGE2Q96GT9 111 aa14.38□□□□□ -0.11
NPC1-214ENST00000593280 ADORA1P30542 326 aa14.37□□□□□ -0.11
NPC1-214ENST00000593280 MROH5Q6ZUA9 1318 aa14.37□□□□□ -0.11
NPC1-214ENST00000593280 KCNJ4P48050 445 aa14.37□□□□□ -0.11
NPC1-214ENST00000593280 VGLL2Q8N8G2 317 aa14.37□□□□□ -0.11
NPC1-214ENST00000593280 NARFQ9UHQ1 456 aa14.37□□□□□ -0.11
NPC1-214ENST00000593280 MYH7P12883 1935 aa14.36□□□□□ -0.11
NPC1-214ENST00000593280 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
NPC1-214ENST00000593280 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
NPC1-214ENST00000593280 MAP4K1Q92918 833 aa14.36□□□□□ -0.11
NPC1-214ENST00000593280 KCNB2Q92953 911 aa14.36□□□□□ -0.11
NPC1-214ENST00000593280 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
NPC1-214ENST00000593280 BCL11BQ9C0K0 894 aaPredicted RBP14.36□□□□□ -0.11
NPC1-214ENST00000593280 RTCBQ9Y3I0 505 aaKnown RBP14.36□□□□□ -0.11
NPC1-214ENST00000593280 RBM8AQ9Y5S9 174 aaKnown RBP14.36□□□□□ -0.11
NPC1-214ENST00000593280 ZPR1O75312 459 aa14.35□□□□□ -0.11
NPC1-214ENST00000593280 PDE8BO95263 885 aa14.35□□□□□ -0.11
NPC1-214ENST00000593280 USPL1Q5W0Q7 1092 aa14.35□□□□□ -0.11
NPC1-214ENST00000593280 ZNF589Q86UQ0 364 aaPredicted RBP14.35□□□□□ -0.11
NPC1-214ENST00000593280 MPHOSPH8Q99549 860 aa14.35□□□□□ -0.11
NPC1-214ENST00000593280 A0A1B0GUL6 1792 aa14.35□□□□□ -0.11
NPC1-214ENST00000593280 ZKSCAN1P17029 563 aaPredicted RBP14.34□□□□□ -0.11
NPC1-214ENST00000593280 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
NPC1-214ENST00000593280 NECTIN1Q15223 517 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 PUM3Q15397 648 aaKnown RBP14.34□□□□□ -0.11
NPC1-214ENST00000593280 MCMDC2Q4G0Z9 681 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 RNF20Q5VTR2 975 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 TBC1D9BQ66K14 1250 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 CREB3L3Q68CJ9 461 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 ZNF772Q68DY9 489 aaPredicted RBP14.34□□□□□ -0.11
NPC1-214ENST00000593280 BCL2L12Q9HB09 334 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 EP400Q96L91 3159 aa14.34□□□□□ -0.11
NPC1-214ENST00000593280 TAF5LO75529 589 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.11
NPC1-214ENST00000593280 LRRFIP1Q32MZ4 808 aaKnown RBP14.33□□□□□ -0.11
NPC1-214ENST00000593280 ERFEQ4G0M1 354 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 BICDL1Q6ZP65 573 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 SMIM5Q71RC9 77 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 TMX3Q96JJ7 454 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 NYXQ9GZU5 481 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 SEC31BQ9NQW1 1179 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 HELLSQ9NRZ9 838 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 SRP68Q9UHB9 627 aaKnown RBP14.33□□□□□ -0.11
NPC1-214ENST00000593280 AKAP11Q9UKA4 1901 aa14.33□□□□□ -0.11
NPC1-214ENST00000593280 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
NPC1-214ENST00000593280 FAM196AQ6ZSG2 479 aa14.33□□□□□ -0.12
NPC1-214ENST00000593280 KRT27Q7Z3Y8 459 aa14.33□□□□□ -0.12
NPC1-214ENST00000593280 LPIN2Q92539 896 aa14.33□□□□□ -0.12
NPC1-214ENST00000593280 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
NPC1-214ENST00000593280 TM6SF1Q9BZW5 370 aa14.33□□□□□ -0.12
NPC1-214ENST00000593280 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.12
NPC1-214ENST00000593280 UBR3Q6ZT12 1888 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 SLC27A2O14975 620 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 SLC5A1P13866 664 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 SSFA2P28290 1259 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 RAB3GAP1Q15042 981 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 ZMYM1Q5SVZ6 1142 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 ZNF512BQ96KM6 892 aaPredicted RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 SETDB2Q96T68 719 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 SEC62Q99442 399 aaKnown RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 CDC5LQ99459 802 aaKnown RBP14.32□□□□□ -0.12
NPC1-214ENST00000593280 HMG20BQ9P0W2 317 aa14.32□□□□□ -0.12
NPC1-214ENST00000593280 CHGBP05060 677 aa14.31□□□□□ -0.12
NPC1-214ENST00000593280 FGFR2P21802 821 aa14.31□□□□□ -0.12
NPC1-214ENST00000593280 SCARF1Q14162 830 aa14.31□□□□□ -0.12
NPC1-214ENST00000593280 CCDC129Q6ZRS4 1044 aa14.31□□□□□ -0.12
NPC1-214ENST00000593280 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
NPC1-214ENST00000593280 TTC14Q96N46 770 aa14.31□□□□□ -0.12
NPC1-214ENST00000593280 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
NPC1-214ENST00000593280 RPAP1Q9BWH6 1393 aaPredicted RBP14.31□□□□□ -0.12
NPC1-214ENST00000593280 COL4A1P02462 1669 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 ZFYP08048 801 aaPredicted RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 ZAP70P43403 619 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 CUL4AQ13619 759 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 SF3B3Q15393 1217 aaKnown RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
NPC1-214ENST00000593280 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
NPC1-214ENST00000593280 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms