RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 TUBB4AP04350 444 aa20.73■□□□□ 0.91
H3F3B-211ENST00000591893 HSP90B1P14625 803 aaKnown RBP20.73■□□□□ 0.91
H3F3B-211ENST00000591893 FBXW7Q969H0 707 aa20.73■□□□□ 0.91
H3F3B-211ENST00000591893 JCADQ9P266 1359 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 ZRANB2O95218 330 aaKnown RBP eCLIP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 KRT32Q14532 448 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 NUTM2GQ5VZR2 741 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 ARMCX5Q6P1M9 558 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 EAF2Q96CJ1 260 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 CCDC8Q9H0W5 538 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 BOLA2Q9H3K6 86 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 ARGLU1Q9NWB6 273 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 ROBO2Q9HCK4 1378 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 KCNJ6P48051 423 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 TMCO3Q6UWJ1 677 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 ERCC4Q92889 916 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 TRERF1Q96PN7 1200 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 TSPYL1Q9H0U9 437 aa20.72■□□□□ 0.91
H3F3B-211ENST00000591893 C9orf78Q9NZ63 289 aaPredicted RBP20.72■□□□□ 0.91
H3F3B-211ENST00000591893 SFPQP23246 707 aaKnown RBP eCLIP20.71■□□□□ 0.91
H3F3B-211ENST00000591893 TEX35Q5T0J7 233 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 Q6ZUG5 572 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 TMC6Q7Z403 805 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 NEK1Q96PY6 1258 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 FSIP1Q8NA03 581 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
H3F3B-211ENST00000591893 NRDCO43847 1150 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 ANXA1P04083 346 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 UBXN4Q92575 508 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 XPO4Q9C0E2 1151 aaKnown RBP20.7■□□□□ 0.9
H3F3B-211ENST00000591893 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.7■□□□□ 0.9
H3F3B-211ENST00000591893 TMEM2Q9UHN6 1383 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 TAF5LO75529 589 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 SASH1O94885 1247 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 SMC2O95347 1197 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 TPM4P67936 248 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 NAA16Q6N069 864 aaPredicted RBP20.7■□□□□ 0.9
H3F3B-211ENST00000591893 SMARCC2Q8TAQ2 1214 aa20.7■□□□□ 0.9
H3F3B-211ENST00000591893 ORC3Q9UBD5 711 aaPredicted RBP20.7■□□□□ 0.9
H3F3B-211ENST00000591893 EIF4A1P60842 406 aaKnown RBP20.69■□□□□ 0.9
H3F3B-211ENST00000591893 SCRN1Q12765 414 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 MAPK8IP2Q13387 824 aaPredicted RBP20.69■□□□□ 0.9
H3F3B-211ENST00000591893 GORABQ5T7V8 394 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 USPL1Q5W0Q7 1092 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 HOMER1Q86YM7 354 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 FOSBP53539 338 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
H3F3B-211ENST00000591893 IFNKQ9P0W0 207 aa20.69■□□□□ 0.9
H3F3B-211ENST00000591893 ME1P48163 572 aa20.68■□□□□ 0.9
H3F3B-211ENST00000591893 ZNF396Q96N95 335 aaPredicted RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 POLR3GO15318 223 aaPredicted RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 HOXB7P09629 217 aa20.68■□□□□ 0.9
H3F3B-211ENST00000591893 ETF1P62495 437 aaKnown RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 G3BP1Q13283 466 aaKnown RBP eCLIP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
H3F3B-211ENST00000591893 RAD51AP2Q09MP3 1159 aa20.68■□□□□ 0.9
H3F3B-211ENST00000591893 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 LLPHQ9BRT6 129 aaKnown RBP20.68■□□□□ 0.9
H3F3B-211ENST00000591893 DNAI1Q9UI46 699 aa20.68■□□□□ 0.9
H3F3B-211ENST00000591893 PHLPP2Q6ZVD8 1323 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 ATL3Q6DD88 541 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 SDF4Q9BRK5 362 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 ALDH1L1O75891 902 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 NEK11Q8NG66 645 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 FEZ2Q9UHY8 353 aaPredicted RBP20.67■□□□□ 0.9
H3F3B-211ENST00000591893 HDAC5Q9UQL6 1122 aa20.67■□□□□ 0.9
H3F3B-211ENST00000591893 TXLNBQ8N3L3 684 aa20.66■□□□□ 0.9
H3F3B-211ENST00000591893 NSUN7Q8NE18 718 aaKnown RBP20.66■□□□□ 0.9
H3F3B-211ENST00000591893 MNS1Q8NEH6 495 aa20.66■□□□□ 0.9
H3F3B-211ENST00000591893 EID1Q9Y6B2 187 aa20.66■□□□□ 0.9
H3F3B-211ENST00000591893 FMR1NBQ8N0W7 255 aaPredicted RBP20.66■□□□□ 0.9
H3F3B-211ENST00000591893 TRIM34Q9BYJ4 488 aa20.66■□□□□ 0.9
H3F3B-211ENST00000591893 ZRSR1Q15695 479 aaKnown RBP20.65■□□□□ 0.9
H3F3B-211ENST00000591893 DPCR1Q3MIW9 517 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 BPIFA3Q9BQP9 254 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 MAP3K2Q9Y2U5 619 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 NWD1Q149M9 1564 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 CCP110O43303 1012 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 PFKFB2O60825 505 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 MRPS27Q92552 414 aaKnown RBP20.65■□□□□ 0.9
H3F3B-211ENST00000591893 SRRTQ9BXP5 876 aaKnown RBP20.65■□□□□ 0.9
H3F3B-211ENST00000591893 LRRC2Q9BYS8 371 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 PTPRUQ92729 1446 aa20.65■□□□□ 0.9
H3F3B-211ENST00000591893 ATP8B1O43520 1251 aa20.64■□□□□ 0.89
H3F3B-211ENST00000591893 TADA3O75528 432 aa20.64■□□□□ 0.89
H3F3B-211ENST00000591893 HDGFP51858 240 aaKnown RBP20.64■□□□□ 0.89
H3F3B-211ENST00000591893 KIAA1468Q9P260 1216 aa20.64■□□□□ 0.89
H3F3B-211ENST00000591893 COL15A1P39059 1388 aa20.64■□□□□ 0.89
H3F3B-211ENST00000591893 PTPDC1A2A3K4 754 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 SEC31AO94979 1220 aaKnown RBP20.63■□□□□ 0.89
H3F3B-211ENST00000591893 HOXC9P31274 260 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 PCDHA7Q9UN72 937 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 CEMIPQ8WUJ3 1361 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 CWF19L2Q2TBE0 894 aaKnown RBP20.63■□□□□ 0.89
H3F3B-211ENST00000591893 MUM1L1Q5H9M0 696 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 EDC3Q96F86 508 aaKnown RBP20.63■□□□□ 0.89
H3F3B-211ENST00000591893 UBXN6Q9BZV1 441 aa20.63■□□□□ 0.89
H3F3B-211ENST00000591893 A0A1B0GVL5 298 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms