RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 VPS53Q5VIR6 699 aa8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 RSRC2Q7L4I2 434 aaKnown RBP8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 KAT2BQ92831 832 aa8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 BICC1Q9H694 974 aaKnown RBP8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 ZSWIM4Q9H7M6 989 aa8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 CYP46A1Q9Y6A2 500 aa8.96□□□□□ -0.97
NEDD4L-229ENST00000590506 A0A087WUV0 522 aaPredicted RBP8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 CCDC189A1A4V9 331 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 ANO10Q9NW15 660 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 GOLGA8FQ08AF8 430 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 GOLGA8DPQ0D2H9 430 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 WWC2Q6AWC2 1192 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 CCAR1Q8IX12 1150 aaKnown RBP8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 CEP57L1Q8IYX8 460 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 CNNM3Q8NE01 707 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 SUGCTQ9HAC7 445 aa8.96□□□□□ -0.98
NEDD4L-229ENST00000590506 CCP110O43303 1012 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 GNAI2P04899 355 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 PDCP20941 246 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 KCNJ6P48051 423 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 LIG3P49916 1009 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 PTH1RQ03431 593 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 SPOCK2Q92563 424 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 RABGGTAQ92696 567 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 GOLGA1Q92805 767 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 DDX11Q96FC9 970 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 WDR24Q96S15 920 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 UTP14AQ9BVJ6 771 aaKnown RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 GOLPH3LQ9H4A5 285 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 ADCY9O60503 1353 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 DLG5Q8TDM6 1919 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 CDK12Q9NYV4 1490 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 RIMS2Q9UQ26 1411 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 CCDC196A0A1B0GTZ2 297 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 SCP2P22307 547 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 HNRNPH1P31943 449 aaKnown RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 TXLNAP40222 546 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 MAP3K9P80192 1104 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 STK3Q13188 491 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 COL9A3Q14050 684 aaPredicted RBP8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 TCEANC2Q96MN5 208 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
NEDD4L-229ENST00000590506 ADGRB3O60242 1522 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 CCDC151A5D8V7 595 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 VWA3AA6NCI4 1184 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 CTAGE5O15320 804 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 ERLIN2O94905 339 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 GNG11P61952 73 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 PPP2R5AQ15172 486 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 FBXW10Q5XX13 1052 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 G2E3Q7L622 706 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 HDXQ7Z353 690 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 ZSWIM6Q9HCJ5 1215 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 MRFAP1Q9Y605 127 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 PPFIA4O75335 1185 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 BRD3Q15059 726 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 BEND6Q5SZJ8 279 aaPredicted RBP8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 RPAINQ86UA6 219 aa8.94□□□□□ -0.98
NEDD4L-229ENST00000590506 EFCAB6Q5THR3 1501 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 RPGRIP1LQ68CZ1 1315 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 EIF3JO75822 258 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 PSME1Q06323 249 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 PTPN21Q16825 1174 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 JAKMIP3Q5VZ66 844 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 KCNV1Q6PIU1 500 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 DHX58Q96C10 678 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 FTOQ9C0B1 505 aaKnown RBP eCLIP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 ATP7AQ04656 1500 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 PREX1Q8TCU6 1659 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 GOLIM4O00461 696 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 KINO60870 393 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 FOSBP53539 338 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 EIF5P55010 431 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 NKX1-1Q15270 411 aaPredicted RBP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 LRCH2Q5VUJ6 765 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 MPHOSPH8Q99549 860 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 NAT10Q9H0A0 1025 aaKnown RBP8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 SLC24A3Q9HC58 644 aa8.93□□□□□ -0.98
NEDD4L-229ENST00000590506 RAB11FIP3O75154 756 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 RESTQ13127 1097 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 TMED8Q6PL24 325 aaPredicted RBP8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 CCDC73Q6ZRK6 1079 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 CLIC6Q96NY7 704 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 PNKPQ96T60 521 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 FAM204AQ9H8W3 233 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 ABCB6Q9NP58 842 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 CABP1Q9NZU7 370 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 RAI14Q9P0K7 980 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 ANKRD26Q9UPS8 1709 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 ZFYVE9O95405 1425 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 CDC42BPGQ6DT37 1551 aa8.92□□□□□ -0.98
NEDD4L-229ENST00000590506 ATP8B2P98198 1209 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms