RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	THUMPD2	Q9BTF0	503 aa	Known RBP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TRIM5	Q9C035	493 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TMX4	Q9H1E5	349 aa	Predicted RBP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SUDS3	Q9H7L9	328 aa	Predicted RBP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ARFGAP3	Q9NP61	516 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ZCCHC17	Q9NP64	241 aa	Known RBP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SPATS2L	Q9NUQ6	558 aa	Known RBP	6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	NRBP1	Q9UHY1	535 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	AXIN2	Q9Y2T1	843 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ATP6V1D	Q9Y5K8	247 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	KDR	P35968	1356 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PIK3R4	Q99570	1358 aa		6	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SSH2	Q76I76	1423 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ARAP3	Q8WWN8	1544 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PREX1	Q8TCU6	1659 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759		A0A0G2JS52	829 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759		A0A1B0GUA9	196 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CCDC151	A5D8V7	595 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	KIN	O60870	393 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SEC31A	O94979	1220 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SNUPN	O95149	360 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SETSIP	P0DME0	302 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	MYBL2	P10244	700 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SKIL	P12757	684 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TRIM27	P14373	513 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PAX7	P23759	505 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RDX	P35241	583 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RPS6KA3	P51812	740 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TYRO3	Q06418	890 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	APOBR	Q0VD83	1088 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SCRN1	Q12765	414 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PDAP1	Q13442	181 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RBBP5	Q15291	538 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	MAP3K11	Q16584	847 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CCDC144B	Q3MJ40	725 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	WLS	Q5T9L3	541 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TTC22	Q5TAA0	569 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	GIMAP6	Q6P9H5	292 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	FOXR1	Q6PIV2	292 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RBM43	Q6ZSC3	357 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ANKRD18A	Q8IVF6	992 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ITPRIP	Q8IWB1	547 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	AMOTL1	Q8IY63	956 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CCDC144CP	Q8IYA2	1237 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CTCFL	Q8NI51	663 aa	Predicted RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	FAM71B	Q8TC56	605 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	BICD2	Q8TD16	824 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ZNF483	Q8TF39	744 aa	Predicted RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	N4BP2L2	Q92802	583 aa	Predicted RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RUNDC1	Q96C34	613 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	BAG1	Q99933	345 aa	Predicted RBP	5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SRCIN1	Q9C0H9	1055 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CBX8	Q9HC52	389 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ANAPC4	Q9UJX5	808 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	IQGAP3	Q86VI3	1631 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	EFCAB6	Q5THR3	1501 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PTCH1	Q13635	1447 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	FAM135B	Q49AJ0	1406 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	C9orf84	Q5VXU9	1444 aa		5.99	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PLEKHD1	A6NEE1	506 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CCDC69	A6NI79	296 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ERC2	O15083	957 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PPFIA2	O75334	1257 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RAPGEF3	O95398	923 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	GSPT1	P15170	499 aa	Known RBP	5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	MAGEA8	P43361	318 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TPRN	Q4KMQ1	711 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RSRC2	Q7L4I2	434 aa	Known RBP	5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	DRAXIN	Q8NBI3	349 aa	Predicted RBP	5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	LRRN4CL	Q8ND94	238 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RABGGTA	Q92696	567 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PPP1R13B	Q96KQ4	1090 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ACBD3	Q9H3P7	528 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	HOMER3	Q9NSC5	361 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	VPS18	Q9P253	973 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CPSF2	Q9P2I0	782 aa	Known RBP	5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	IMPACT	Q9P2X3	320 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CNPY2	Q9Y2B0	182 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	AKAP2	Q9Y2D5	859 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ADGRL3	Q9HAR2	1447 aa		5.98	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	NEO1	Q92859	1461 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	FSBP	O95073	299 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ZSCAN22	P10073	491 aa	Predicted RBP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	USP5	P45974	858 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CD151	P48509	253 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RBM5	P52756	815 aa	Known RBP eCLIP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	SLC8A3	P57103	927 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	EVC	P57679	992 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ETF1	P62495	437 aa	Known RBP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	GNAI1	P63096	354 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	LONRF2	Q1L5Z9	754 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	PLEKHO1	Q53GL0	409 aa	Predicted RBP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	FOXD4L5	Q5VV16	416 aa	Predicted RBP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	ISM2	Q6H9L7	571 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	RCSD1	Q6JBY9	416 aa		5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	CWC27	Q6UX04	472 aa	Known RBP	5.97	□□□□□ -1.45
ATP6V0A1-223	ENST00000589759	TSHZ1	Q6ZSZ6	1077 aa		5.97	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms