RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 NCAPG2Q86XI2 1143 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 ZGPATQ8N5A5 531 aaKnown RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 PHC3Q8NDX5 983 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 DDX27Q96GQ7 796 aaKnown RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 FAM81BQ96LP2 452 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 SPAG5Q96R06 1193 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 ZSWIM4Q9H7M6 989 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 LRRD1A4D1F6 860 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 PAPOLAP51003 745 aaKnown RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 APOBRQ0VD83 1088 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 DYNC1I2Q13409 638 aaKnown RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 CEP57L1Q8IYX8 460 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 PDILTQ8N807 584 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 TEKT1Q969V4 418 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC47Q96A33 483 aaKnown RBP8.89□□□□□ -0.99
LAMA3-210ENST00000588770 MYOM3Q5VTT5 1437 aa8.89□□□□□ -0.99
LAMA3-210ENST00000588770 PYGBP11216 843 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 PKP1Q13835 747 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 CAMK4Q16566 473 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 KCNB2Q92953 911 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
LAMA3-210ENST00000588770 DHX29Q7Z478 1369 aaKnown RBP8.88□□□□□ -0.99
LAMA3-210ENST00000588770 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 ATP6V1G1O75348 118 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 IQCB1Q15051 598 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 CADPS2Q86UW7 1296 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 LMBR1Q8WVP7 490 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 ZFXP17010 805 aaPredicted RBP8.88□□□□□ -0.99
LAMA3-210ENST00000588770 SLFN5Q08AF3 891 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 PLEKHG4BQ96PX9 1271 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 KIF21BO75037 1637 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 LUC7L3O95232 432 aaKnown RBP8.88□□□□□ -0.99
LAMA3-210ENST00000588770 ZNF165P49910 485 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 MRPL12P52815 198 aaKnown RBP8.88□□□□□ -0.99
LAMA3-210ENST00000588770 Q4G0T1 1027 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 TAOK3Q9H2K8 898 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 C1orf115Q9H7X2 142 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 MKL2Q9ULH7 1088 aa8.88□□□□□ -0.99
LAMA3-210ENST00000588770 RTN3O95197 1032 aaPredicted RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 RAB27AP51159 221 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC40Q4G0X9 1142 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 THEMIS2Q5TEJ8 643 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 SMCR8Q8TEV9 937 aaPredicted RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 UTP14AQ9BVJ6 771 aaKnown RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 PAPOLBQ9NRJ5 636 aaKnown RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 NRBP1Q9UHY1 535 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 PCDHB15Q9Y5E8 787 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 SLC5A9Q2M3M2 681 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 APBB1IPQ7Z5R6 666 aaPredicted RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 CACTINQ8WUQ7 758 aaKnown RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 RPS6KA5O75582 802 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 IFFO1Q0D2I5 559 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 FOXD4Q12950 439 aaPredicted RBP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 ALS2CR12Q96Q35 445 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 AATFQ9NY61 560 aaKnown RBP eCLIP8.87□□□□□ -0.99
LAMA3-210ENST00000588770 BAIAP2L1Q9UHR4 511 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 MYL1P05976 194 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 TMED1Q13445 227 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 SLMAPQ14BN4 828 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 KBTBD12Q3ZCT8 623 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 SH2D4BQ5SQS7 431 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC73Q6ZRK6 1079 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 TMX3Q96JJ7 454 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 ERBB3P21860 1342 aa8.87□□□□□ -0.99
LAMA3-210ENST00000588770 GADD45BO75293 160 aaPredicted RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 GNG11P61952 73 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC15Q0P6D6 951 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 SLC4A10Q6U841 1118 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 REXO1L1PQ8IX06 675 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC150Q8NCX0 1101 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 SDF4Q9BRK5 362 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CCDC151A5D8V7 595 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 MYO1FO00160 1098 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 AHCYL1O43865 530 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 FERP16591 822 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 SF3B2Q13435 895 aaKnown RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 ANO6Q4KMQ2 910 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 DZIP3Q86Y13 1208 aaKnown RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 LRRC8AQ8IWT6 810 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 NACA2Q9H009 215 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 PRM3Q9NNZ6 103 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 MYO1BO43795 1136 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CHD1LQ86WJ1 897 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 LMNTD2Q8IXW0 634 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 UIMC1Q96RL1 719 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 ARPC5LQ9BPX5 153 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 PCDHGA4Q9Y5G9 962 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 ATP2C2O75185 946 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 TBC1D8O95759 1140 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 MCM3P25205 808 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 PSMD7P51665 324 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 DDR1Q08345 913 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 MVPQ14764 893 aaKnown RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 PLEKHO1Q53GL0 409 aaPredicted RBP8.86□□□□□ -0.99
LAMA3-210ENST00000588770 ZNF365Q70YC5 407 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 CKAP2LQ8IYA6 745 aa8.86□□□□□ -0.99
LAMA3-210ENST00000588770 SYTL4Q96C24 671 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms