RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 NRXN2Q9P2S2 1712 aa31.83■■■□□ 2.69
SCAMP4-210ENST00000588555 A0A1B0GUL7 405 aa31.83■■■□□ 2.69
SCAMP4-210ENST00000588555 TIMM10P62072 90 aa31.83■■■□□ 2.69
SCAMP4-210ENST00000588555 CCDC125Q86Z20 511 aa31.83■■■□□ 2.69
SCAMP4-210ENST00000588555 IGHMBP2P38935 993 aaKnown RBP31.82■■■□□ 2.68
SCAMP4-210ENST00000588555 MPHOSPH8Q99549 860 aa31.82■■■□□ 2.68
SCAMP4-210ENST00000588555 AKAP2Q9Y2D5 859 aa31.82■■■□□ 2.68
SCAMP4-210ENST00000588555 MROH5Q6ZUA9 1318 aa31.82■■■□□ 2.68
SCAMP4-210ENST00000588555 NEUROD6Q96NK8 337 aa31.8■■■□□ 2.68
SCAMP4-210ENST00000588555 TRIM6-TRIM34B2RNG4 842 aa31.79■■■□□ 2.68
SCAMP4-210ENST00000588555 PDE8BO95263 885 aa31.79■■■□□ 2.68
SCAMP4-210ENST00000588555 AK9Q5TCS8 1911 aa31.79■■■□□ 2.68
SCAMP4-210ENST00000588555 ATP5JP18859 108 aa31.79■■■□□ 2.68
SCAMP4-210ENST00000588555 ST5P78524 1137 aa31.79■■■□□ 2.68
SCAMP4-210ENST00000588555 MAP4K4O95819 1239 aaPredicted RBP31.78■■■□□ 2.68
SCAMP4-210ENST00000588555 ANKRD18AQ8IVF6 992 aa31.78■■■□□ 2.68
SCAMP4-210ENST00000588555 CELF1Q92879 486 aaKnown RBP31.78■■■□□ 2.68
SCAMP4-210ENST00000588555 RILPL2Q969X0 211 aa31.78■■■□□ 2.68
SCAMP4-210ENST00000588555 A0A1B0GUL6 1792 aa31.77■■■□□ 2.68
SCAMP4-210ENST00000588555 ATP2B3Q16720 1220 aa31.76■■■□□ 2.68
SCAMP4-210ENST00000588555 BSDC1Q9NW68 430 aaPredicted RBP31.76■■■□□ 2.68
SCAMP4-210ENST00000588555 CRY2Q49AN0 593 aa31.76■■■□□ 2.67
SCAMP4-210ENST00000588555 ARAP2Q8WZ64 1704 aa31.75■■■□□ 2.67
SCAMP4-210ENST00000588555 MMP10P09238 476 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 FGFR2P21802 821 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 ADORA1P30542 326 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 CNTROBQ8N137 903 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 HELBQ8NG08 1087 aaPredicted RBP31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 XAGE2Q96GT9 111 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 BOLA2Q9H3K6 86 aa31.74■■■□□ 2.67
SCAMP4-210ENST00000588555 ANKRD31Q8N7Z5 1873 aa31.73■■■□□ 2.67
SCAMP4-210ENST00000588555 RPS8P62241 208 aaKnown RBP31.73■■■□□ 2.67
SCAMP4-210ENST00000588555 PUM3Q15397 648 aaKnown RBP31.73■■■□□ 2.67
SCAMP4-210ENST00000588555 MSL1Q68DK7 614 aa31.73■■■□□ 2.67
SCAMP4-210ENST00000588555 DDX46Q7L014 1031 aaKnown RBP31.73■■■□□ 2.67
SCAMP4-210ENST00000588555 KLRG2A4D1S0 409 aaPredicted RBP31.72■■■□□ 2.67
SCAMP4-210ENST00000588555 CHRNDQ07001 517 aa31.72■■■□□ 2.67
SCAMP4-210ENST00000588555 MFAP1P55081 439 aaKnown RBP31.71■■■□□ 2.67
SCAMP4-210ENST00000588555 CHMLP26374 656 aa31.71■■■□□ 2.67
SCAMP4-210ENST00000588555 CASC1Q6TDU7 716 aa31.71■■■□□ 2.67
SCAMP4-210ENST00000588555 TAF5LO75529 589 aa31.7■■■□□ 2.67
SCAMP4-210ENST00000588555 LPIN2Q92539 896 aa31.7■■■□□ 2.67
SCAMP4-210ENST00000588555 EVI5LQ96CN4 794 aa31.7■■■□□ 2.67
SCAMP4-210ENST00000588555 HAUS7Q99871 368 aa31.69■■■□□ 2.66
SCAMP4-210ENST00000588555 MINPP1Q9UNW1 487 aa31.69■■■□□ 2.66
SCAMP4-210ENST00000588555 PARP3Q9Y6F1 533 aa31.69■■■□□ 2.66
SCAMP4-210ENST00000588555 GRAPQ13588 217 aa31.68■■■□□ 2.66
SCAMP4-210ENST00000588555 GRAPLQ8TC17 118 aaPredicted RBP31.68■■■□□ 2.66
SCAMP4-210ENST00000588555 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.68■■■□□ 2.66
SCAMP4-210ENST00000588555 UPF2Q9HAU5 1272 aaKnown RBP31.68■■■□□ 2.66
SCAMP4-210ENST00000588555 BRIP1Q9BX63 1249 aa31.67■■■□□ 2.66
SCAMP4-210ENST00000588555 PDGFDQ9GZP0 370 aaPredicted RBP31.67■■■□□ 2.66
SCAMP4-210ENST00000588555 SNAP23O00161 211 aa31.66■■■□□ 2.66
SCAMP4-210ENST00000588555 CCDC158Q5M9N0 1113 aa31.66■■■□□ 2.66
SCAMP4-210ENST00000588555 GORABQ5T7V8 394 aa31.66■■■□□ 2.66
SCAMP4-210ENST00000588555 RPGRQ92834 1020 aaKnown RBP31.66■■■□□ 2.66
SCAMP4-210ENST00000588555 TBC1D32Q96NH3 1257 aa31.66■■■□□ 2.66
SCAMP4-210ENST00000588555 HOXA10P31260 410 aaPredicted RBP31.65■■■□□ 2.66
SCAMP4-210ENST00000588555 EDC3Q96F86 508 aaKnown RBP31.65■■■□□ 2.66
SCAMP4-210ENST00000588555 SLC5A1P13866 664 aa31.64■■■□□ 2.66
SCAMP4-210ENST00000588555 NDUFB9Q9Y6M9 179 aa31.64■■■□□ 2.66
SCAMP4-210ENST00000588555 TTC39AQ5SRH9 613 aa31.63■■■□□ 2.65
SCAMP4-210ENST00000588555 ESYT1Q9BSJ8 1104 aa31.63■■■□□ 2.65
SCAMP4-210ENST00000588555 EIF5BO60841 1220 aaKnown RBP31.63■■■□□ 2.65
SCAMP4-210ENST00000588555 IFIT1P09914 478 aaKnown RBP31.63■■■□□ 2.65
SCAMP4-210ENST00000588555 ZNF512BQ96KM6 892 aaPredicted RBP31.63■■■□□ 2.65
SCAMP4-210ENST00000588555 DNAJC2Q99543 621 aaKnown RBP31.62■■■□□ 2.65
SCAMP4-210ENST00000588555 RBM17Q96I25 401 aaKnown RBP31.61■■■□□ 2.65
SCAMP4-210ENST00000588555 AKAP11Q9UKA4 1901 aa31.61■■■□□ 2.65
SCAMP4-210ENST00000588555 UBE4AQ14139 1066 aa31.61■■■□□ 2.65
SCAMP4-210ENST00000588555 COL11A2P13942 1736 aaPredicted RBP31.6■■■□□ 2.65
SCAMP4-210ENST00000588555 SCARF1Q14162 830 aa31.6■■■□□ 2.65
SCAMP4-210ENST00000588555 CCDC102BQ68D86 513 aa31.6■■■□□ 2.65
SCAMP4-210ENST00000588555 C22orf23Q9BZE7 217 aa31.6■■■□□ 2.65
SCAMP4-210ENST00000588555 PHKA1P46020 1223 aa31.59■■■□□ 2.65
SCAMP4-210ENST00000588555 CRAMP1Q96RY5 1269 aa31.59■■■□□ 2.65
SCAMP4-210ENST00000588555 ANKRD2Q9GZV1 360 aa31.59■■■□□ 2.65
SCAMP4-210ENST00000588555 IL25Q9H293 177 aa31.59■■■□□ 2.65
SCAMP4-210ENST00000588555 PAG1Q9NWQ8 432 aa31.59■■■□□ 2.65
SCAMP4-210ENST00000588555 ARID4AP29374 1257 aaPredicted RBP31.58■■■□□ 2.65
SCAMP4-210ENST00000588555 UPF1Q92900 1129 aaKnown RBP eCLIP31.58■■■□□ 2.65
SCAMP4-210ENST00000588555 FSD1Q9BTV5 496 aa31.58■■■□□ 2.65
SCAMP4-210ENST00000588555 RFX7Q2KHR2 1363 aa31.58■■■□□ 2.65
SCAMP4-210ENST00000588555 WTIPA6NIX2 430 aaPredicted RBP31.58■■■□□ 2.65
SCAMP4-210ENST00000588555 SRGNP10124 158 aa31.57■■■□□ 2.64
SCAMP4-210ENST00000588555 PDE6BP35913 854 aa31.57■■■□□ 2.64
SCAMP4-210ENST00000588555 MCAMP43121 646 aa31.57■■■□□ 2.64
SCAMP4-210ENST00000588555 SLC16A10Q8TF71 515 aa31.57■■■□□ 2.64
SCAMP4-210ENST00000588555 GOLIM4O00461 696 aa31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 SLC51AQ86UW1 340 aa31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 KBTBD3Q8NAB2 608 aa31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 REC8O95072 547 aa31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 ANP32AP39687 249 aaKnown RBP31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 RBM25P49756 843 aaKnown RBP31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 DIAPH3Q9NSV4 1193 aa31.56■■■□□ 2.64
SCAMP4-210ENST00000588555 HIP1O00291 1037 aa31.55■■■□□ 2.64
SCAMP4-210ENST00000588555 SGSM2O43147 1006 aa31.55■■■□□ 2.64
SCAMP4-210ENST00000588555 USP26Q9BXU7 913 aa31.55■■■□□ 2.64
SCAMP4-210ENST00000588555 BBOX1O75936 387 aa31.54■■■□□ 2.64
SCAMP4-210ENST00000588555 UQCRFS1P1P0C7P4 283 aa31.54■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms