RNA–Protein interactions for RNA: ENST00000584754.1

PPP4R1-229, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-229ENST00000584754 GRIK4Q16099 956 aa6.55□□□□□ -1.36
PPP4R1-229ENST00000584754 C8orf34Q49A92 452 aa6.55□□□□□ -1.36
PPP4R1-229ENST00000584754 SEMA6BQ9H3T3 888 aa6.55□□□□□ -1.36
PPP4R1-229ENST00000584754 CNTN3Q9P232 1028 aa6.55□□□□□ -1.36
PPP4R1-229ENST00000584754 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 PDGFAP04085 211 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 GRIK5Q16478 980 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 B4GALNT3Q6L9W6 998 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 CD163Q86VB7 1156 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 ELP3Q9H9T3 547 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 CCDC87Q9NVE4 849 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 NOP53Q9NZM5 478 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 POLIQ9UNA4 740 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 USTQ9Y2C2 406 aa6.54□□□□□ -1.36
PPP4R1-229ENST00000584754 ZBTB7CA1YPR0 619 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 NRLP54845 237 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 FKBP4Q02790 459 aaKnown RBP eCLIP6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 DOC2BQ14184 412 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 GDF6Q6KF10 455 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 ZNF438Q7Z4V0 828 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 TTC16Q8NEE8 873 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 PLD4Q96BZ4 506 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 PRDM6Q9NQX0 595 aa6.53□□□□□ -1.36
PPP4R1-229ENST00000584754 ATP11AP98196 1134 aa6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 TRIM28Q13263 835 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 SHISA2Q6UWI4 295 aa6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 C1orf127Q8N9H9 656 aa6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 OR13H1Q8NG92 308 aa6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 KANSL3Q9P2N6 904 aa6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 FNDC3AQ9Y2H6 1198 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-229ENST00000584754 NISCHQ9Y2I1 1504 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 A0A0A0MRY4 1105 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 FZD6O60353 706 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 TRPA1O75762 1119 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 ACPPP15309 386 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 ZMYM1Q5SVZ6 1142 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 ADAMTSL4Q6UY14 1074 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 TRAIPQ9BWF2 469 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 ABI2Q9NYB9 513 aaPredicted RBP6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
PPP4R1-229ENST00000584754 SCO2A0A1W2PP80 73 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 H3BRB1 525 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 GHRHP01286 108 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 SPATA31C1P0DKV0 1188 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 PCSK2P16519 638 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 MZF1P28698 734 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 CDC25BP30305 580 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 ECM1Q16610 540 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 PRRT3Q5FWE3 981 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 MSL1Q68DK7 614 aa6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 TUT1Q9H6E5 874 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-229ENST00000584754 ICMTO60725 284 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 FAM13AO94988 1023 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 RPLP1P05386 114 aaKnown RBP6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 NPR3P17342 541 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 HYAL2Q12891 473 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 IL22RA1Q8N6P7 574 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 RASSF4Q9H2L5 321 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 FRRS1LQ9P0K9 344 aa6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 FOXD3Q9UJU5 478 aaPredicted RBP6.49□□□□□ -1.37
PPP4R1-229ENST00000584754 SELPP16109 830 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 SOX18P35713 384 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 SF3B2Q13435 895 aaKnown RBP6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 CEP135Q66GS9 1140 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 ILDR2Q71H61 639 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 NCAPG2Q86XI2 1143 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 WFDC8Q8IUA0 241 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 RBSNQ9H1K0 784 aa6.48□□□□□ -1.37
PPP4R1-229ENST00000584754 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 CES1P23141 567 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 GATA4P43694 442 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 PDE12Q6L8Q7 609 aaKnown RBP6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 TXNDC11Q6PKC3 985 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 TXNDC2Q86VQ3 553 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 GLYCTKQ8IVS8 523 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 HHIPQ96QV1 700 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 CHRDQ9H2X0 955 aa6.47□□□□□ -1.37
PPP4R1-229ENST00000584754 EREGO14944 169 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 TNFRSF21O75509 655 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 APBA3O96018 575 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 POLR3DP05423 398 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 HOXD8P13378 290 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 RAC1P63000 192 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 FMR1NBQ8N0W7 255 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 CEP120Q8N960 986 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 TTC9Q92623 222 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 SPACA7Q96KW9 195 aa6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 SH2B1Q9NRF2 756 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-229ENST00000584754 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 LINC01387J3KSC0 135 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 ITGB7P26010 798 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 ARHGAP4P98171 946 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 XKR5Q6UX68 686 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 POP1Q99575 1024 aaKnown RBP6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 SALL4Q9UJQ4 1053 aa6.45□□□□□ -1.38
PPP4R1-229ENST00000584754 PHACTR2O75167 634 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms