RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 WDR90Q96KV7 1748 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 GNAT3A8MTJ3 354 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 TICAM2Q86XR7 235 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 MARCH10Q8NA82 808 aaPredicted RBP3.98□□□□□ -1.77
CCDC178-213ENST00000583930 HS3ST6Q96QI5 342 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 CAMKK2Q96RR4 588 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 PDZRN3Q9UPQ7 1066 aa3.98□□□□□ -1.77
CCDC178-213ENST00000583930 BHMG1C9JSJ3 638 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 RXRBP28702 533 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 USP46P62068 366 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 CRTC2Q53ET0 693 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 POTEAQ6S8J7 498 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 SLF2Q8IX21 1173 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 MRPL50Q8N5N7 158 aaKnown RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 TMC1Q8TDI8 760 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 KRTAP3-3Q9BYR6 98 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 KRTAP3-2Q9BYR7 98 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 WBP1LQ9NX94 342 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 ZMIZ1Q9ULJ6 1067 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 MYH13Q9UKX3 1938 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 LAMA4Q16363 1823 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 KLRG2A4D1S0 409 aaPredicted RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 TMEM88BA6NKF7 163 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 SNPHO15079 494 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 GJA5P36382 358 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 TRIM28Q13263 835 aaKnown RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 SEMA3FQ13275 785 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 SAFB2Q14151 953 aaKnown RBP eCLIP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 RGS22Q8NE09 1264 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 DDX17Q92841 729 aaKnown RBP3.97□□□□□ -1.77
CCDC178-213ENST00000583930 OCSTAMPQ9BR26 566 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 MYH7P12883 1935 aa3.97□□□□□ -1.77
CCDC178-213ENST00000583930 AMPHP49418 695 aa3.96□□□□□ -1.77
CCDC178-213ENST00000583930 SLFN5Q08AF3 891 aa3.96□□□□□ -1.77
CCDC178-213ENST00000583930 MTHFSDQ2M296 383 aaKnown RBP3.96□□□□□ -1.77
CCDC178-213ENST00000583930 TMEM164Q5U3C3 297 aa3.96□□□□□ -1.77
CCDC178-213ENST00000583930 RETREG3Q86VR2 466 aa3.96□□□□□ -1.77
CCDC178-213ENST00000583930 WWC1Q8IX03 1113 aa3.96□□□□□ -1.77
CCDC178-213ENST00000583930 ZNF594Q96JF6 807 aaPredicted RBP3.96□□□□□ -1.77
CCDC178-213ENST00000583930 ERVV-1B6SEH8 477 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 E9PSI1 815 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 GNAI1P63096 354 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 FLAD1Q8NFF5 587 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 LRCH3Q96II8 777 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 QTRT2Q9H974 415 aaKnown RBP3.96□□□□□ -1.78
CCDC178-213ENST00000583930 PRM3Q9NNZ6 103 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.96□□□□□ -1.78
CCDC178-213ENST00000583930 HPS5Q9UPZ3 1129 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 CHD4Q14839 1912 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 RRS1Q15050 365 aaKnown RBP3.96□□□□□ -1.78
CCDC178-213ENST00000583930 ERICH6BQ5W0A0 696 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 ADGRD1Q6QNK2 874 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 KRT27Q7Z3Y8 459 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.96□□□□□ -1.78
CCDC178-213ENST00000583930 SLC16A10Q8TF71 515 aa3.96□□□□□ -1.78
CCDC178-213ENST00000583930 PTPRCP08575 1304 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 SKIP12755 728 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 SSFA2P28290 1259 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 NCOA4Q13772 614 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 SEPT12Q8IYM1 358 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 IL17REQ8NFR9 667 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 PLA2G12BQ9BX93 195 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 SCN4AP35499 1836 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 LOC285556D6RIA3 1793 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 PALLDQ8WX93 1383 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 MAGEB6P1A0A0J9YX57 407 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 STAU1O95793 577 aaKnown RBP3.95□□□□□ -1.78
CCDC178-213ENST00000583930 CSB-PGBD3P0DP91 1061 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 EIF4A1P60842 406 aaKnown RBP3.95□□□□□ -1.78
CCDC178-213ENST00000583930 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
CCDC178-213ENST00000583930 TAF7Q15545 349 aaPredicted RBP3.95□□□□□ -1.78
CCDC178-213ENST00000583930 DDB1Q16531 1140 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 WASHC4Q2M389 1173 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 CLEC4GQ6UXB4 293 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 RAPGEF4Q8WZA2 1011 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 USB1Q9BQ65 265 aaKnown RBP3.95□□□□□ -1.78
CCDC178-213ENST00000583930 ADAMTS8Q9UP79 889 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 KIF16BQ96L93 1317 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 CDHR2Q9BYE9 1310 aa3.95□□□□□ -1.78
CCDC178-213ENST00000583930 CDK5RAP2Q96SN8 1893 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 EXOC5O00471 708 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 RAB15P59190 212 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 PTCRAQ6ISU1 281 aaPredicted RBP3.94□□□□□ -1.78
CCDC178-213ENST00000583930 CCDC24Q8N4L8 307 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 NBPF3Q9H094 633 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 ABCC4O15439 1325 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 A0A087WZG4 1122 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 USP17L3A6NCW0 530 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 USP17L4A6NCW7 530 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 IL6STP40189 918 aaPredicted RBP3.94□□□□□ -1.78
CCDC178-213ENST00000583930 SERPINB4P48594 390 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 DUSP27Q5VZP5 1158 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 DIEXFQ68CQ4 756 aaKnown RBP3.94□□□□□ -1.78
CCDC178-213ENST00000583930 PHLDB3Q6NSJ2 640 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 TMED8Q6PL24 325 aaPredicted RBP3.94□□□□□ -1.78
CCDC178-213ENST00000583930 USP17L2Q6R6M4 530 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 LYPD8Q6UX82 237 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 USP17L1Q7RTZ2 530 aa3.94□□□□□ -1.78
CCDC178-213ENST00000583930 FAM160A2Q8N612 972 aaPredicted RBP3.94□□□□□ -1.78
CCDC178-213ENST00000583930 ZNF516Q92618 1163 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms