RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 NLRP3Q96P20 1036 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 ZNF408Q9H9D4 720 aa8.34□□□□□ -1.07
TVP23B-210ENST00000582288 CNOT7Q9UIV1 285 aaKnown RBP8.34□□□□□ -1.07
TVP23B-210ENST00000582288 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 PER1O15534 1290 aaPredicted RBP8.33□□□□□ -1.08
TVP23B-210ENST00000582288 TRPA1O75762 1119 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 SLC10A3P09131 477 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 ZNF157P51786 506 aaPredicted RBP8.33□□□□□ -1.08
TVP23B-210ENST00000582288 PARP10Q53GL7 1025 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 DPP8Q6V1X1 898 aaPredicted RBP8.33□□□□□ -1.08
TVP23B-210ENST00000582288 KIF6Q6ZMV9 814 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 PPP1R42Q7Z4L9 355 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 USP48Q86UV5 1035 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 ZNF34Q8IZ26 560 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
TVP23B-210ENST00000582288 CSRNP1Q96S65 589 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
TVP23B-210ENST00000582288 HPS5Q9UPZ3 1129 aa8.33□□□□□ -1.08
TVP23B-210ENST00000582288 UBN2Q6ZU65 1347 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
TVP23B-210ENST00000582288 NTSR2O95665 410 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 HSPA5P11021 654 aaKnown RBP8.32□□□□□ -1.08
TVP23B-210ENST00000582288 RPS12P25398 132 aaKnown RBP8.32□□□□□ -1.08
TVP23B-210ENST00000582288 SUSD4Q5VX71 490 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 KRT26Q7Z3Y9 468 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 MPNDQ8N594 471 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 PHACTR3Q96KR7 559 aa8.32□□□□□ -1.08
TVP23B-210ENST00000582288 ERBB4Q15303 1308 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 NUP98P52948 1817 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 AKAP11Q9UKA4 1901 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 RAD17O75943 681 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 FKBP1BP68106 108 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-210ENST00000582288 GIGYF2Q6Y7W6 1299 aaKnown RBP8.31□□□□□ -1.08
TVP23B-210ENST00000582288 ZNF467Q7Z7K2 595 aaPredicted RBP8.31□□□□□ -1.08
TVP23B-210ENST00000582288 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 PNISRQ8TF01 805 aaKnown RBP8.31□□□□□ -1.08
TVP23B-210ENST00000582288 DCPSQ96C86 337 aaKnown RBP8.31□□□□□ -1.08
TVP23B-210ENST00000582288 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
TVP23B-210ENST00000582288 ABCC4O15439 1325 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 YDJCA8MPS7 323 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 HABP4Q5JVS0 413 aaKnown RBP8.3□□□□□ -1.08
TVP23B-210ENST00000582288 FBXO46Q6PJ61 603 aaPredicted RBP8.3□□□□□ -1.08
TVP23B-210ENST00000582288 ANKRD13DQ6ZTN6 518 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 CFHR5Q9BXR6 569 aa8.3□□□□□ -1.08
TVP23B-210ENST00000582288 ZNF609O15014 1411 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 TCERG1O14776 1098 aaKnown RBP8.29□□□□□ -1.08
TVP23B-210ENST00000582288 GPTP24298 496 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 INTS3Q68E01 1043 aaKnown RBP8.29□□□□□ -1.08
TVP23B-210ENST00000582288 SAMD7Q7Z3H4 446 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 SULF1Q8IWU6 871 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 UTP14AQ9BVJ6 771 aaKnown RBP8.29□□□□□ -1.08
TVP23B-210ENST00000582288 ZSWIM6Q9HCJ5 1215 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 ANKRD36CQ5JPF3 1778 aa8.29□□□□□ -1.08
TVP23B-210ENST00000582288 MKI67P46013 3256 aaKnown RBP8.29□□□□□ -1.08
TVP23B-210ENST00000582288 DUOX1Q9NRD9 1551 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 TM4SF4P48230 202 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 GRAPQ13588 217 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 TTLL7Q6ZT98 887 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
TVP23B-210ENST00000582288 MCM10Q7L590 875 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 RASAL3Q86YV0 1011 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 GRAPLQ8TC17 118 aaPredicted RBP8.28□□□□□ -1.08
TVP23B-210ENST00000582288 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
TVP23B-210ENST00000582288 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 HDAC9Q9UKV0 1011 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 NUDCQ9Y266 331 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 LRRC37AA6NMS7 1700 aa8.28□□□□□ -1.08
TVP23B-210ENST00000582288 SHTN1A0MZ66 631 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 ADM5C9JUS6 153 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 PSMD14O00487 310 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 TBC1D10BQ4KMP7 808 aaPredicted RBP8.27□□□□□ -1.09
TVP23B-210ENST00000582288 HSP90AB3PQ58FF7 597 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 CC2D1BQ5T0F9 858 aaKnown RBP8.27□□□□□ -1.09
TVP23B-210ENST00000582288 SLC51AQ86UW1 340 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 NGEFQ8N5V2 710 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 CDCA5Q96FF9 252 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 ZBTB3Q9H5J0 574 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 PAPPA2Q9BXP8 1791 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 PITPNM2Q9BZ72 1349 aa8.27□□□□□ -1.09
TVP23B-210ENST00000582288 DDX60Q8IY21 1712 aaKnown RBP8.26□□□□□ -1.09
TVP23B-210ENST00000582288 HTTP42858 3142 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 KDM3BQ7LBC6 1761 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 GPR25O00155 361 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 EGFRP00533 1210 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
TVP23B-210ENST00000582288 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
TVP23B-210ENST00000582288 KIF4BQ2VIQ3 1234 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 DLK2Q6UY11 383 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 EYA3Q99504 573 aa8.26□□□□□ -1.09
TVP23B-210ENST00000582288 RRP7AQ9Y3A4 280 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms