RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 HOXD8P13378 290 aaPredicted RBP7.29□□□□□ -1.24
SMG8-205ENST00000580798 SOX18P35713 384 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 GRIK1P39086 918 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 FLIIQ13045 1269 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 PTK7Q13308 1070 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 LARP1Q6PKG0 1096 aaKnown RBP7.29□□□□□ -1.24
SMG8-205ENST00000580798 DTX1Q86Y01 620 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
SMG8-205ENST00000580798 MYO19Q96H55 970 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 C7orf69Q9H7B7 122 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 TFIP11Q9UBB9 837 aaKnown RBP7.29□□□□□ -1.24
SMG8-205ENST00000580798 PPME1Q9Y570 386 aa7.29□□□□□ -1.24
SMG8-205ENST00000580798 MAFBQ9Y5Q3 323 aaPredicted RBP7.29□□□□□ -1.24
SMG8-205ENST00000580798 TRIM42Q8IWZ5 723 aa7.28□□□□□ -1.24
SMG8-205ENST00000580798 UTP4Q969X6 686 aaKnown RBP7.28□□□□□ -1.24
SMG8-205ENST00000580798 MUC3BQ9H195 1237 aa7.28□□□□□ -1.24
SMG8-205ENST00000580798 RBSNQ9H1K0 784 aa7.28□□□□□ -1.24
SMG8-205ENST00000580798 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
SMG8-205ENST00000580798 HMX2A2RU54 273 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 LINC01387J3KSC0 135 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 UVSSAQ2YD98 709 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 RNF43Q68DV7 783 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 ACAD11Q709F0 780 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 KCNK4Q9NYG8 393 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
SMG8-205ENST00000580798 TM4SF5O14894 197 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 FOXO3O43524 673 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 WNT11O96014 354 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 CD68P34810 354 aaPredicted RBP7.26□□□□□ -1.25
SMG8-205ENST00000580798 TXNDC11Q6PKC3 985 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 TREML1Q86YW5 311 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 ANKMY2Q8IV38 441 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 CACTIN-AS1Q8N1I8 211 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 FAM46AQ96IP4 442 aaKnown RBP7.26□□□□□ -1.25
SMG8-205ENST00000580798 DBNDD2Q9BQY9 259 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 ADGRE2Q9UHX3 823 aa7.26□□□□□ -1.25
SMG8-205ENST00000580798 WEE1P30291 646 aa7.25□□□□□ -1.25
SMG8-205ENST00000580798 USP17L15C9J2P7 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L10C9JJH3 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L13C9JLJ4 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L12C9JPN9 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L11C9JVI0 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L21D6R901 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L18D6R9N7 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L22D6RA61 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L17D6RBQ6 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L19D6RCP7 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L20D6RJB6 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 USP17L24Q0WX57 530 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 KANK4Q5T7N3 995 aaPredicted RBP7.24□□□□□ -1.25
SMG8-205ENST00000580798 KIAA1211Q6ZU35 1233 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 VTI1AQ96AJ9 217 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 MYRFLQ96LU7 910 aa7.24□□□□□ -1.25
SMG8-205ENST00000580798 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 ATP11AP98196 1134 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 TRIP4Q15650 581 aaPredicted RBP7.22□□□□□ -1.25
SMG8-205ENST00000580798 COL13A1Q5TAT6 717 aaPredicted RBP7.22□□□□□ -1.25
SMG8-205ENST00000580798 ADAMTSL4Q6UY14 1074 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 NLRP13Q86W25 1043 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 SHKBP1Q8TBC3 707 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 GLMNQ92990 594 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 ARXQ96QS3 562 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 CARD10Q9BWT7 1032 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
SMG8-205ENST00000580798 CDC25BP30305 580 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 DUOXA2Q1HG44 320 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 CEP135Q66GS9 1140 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 CLEC10AQ8IUN9 316 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 FAM20CQ8IXL6 584 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 CLUAP1Q96AJ1 413 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
SMG8-205ENST00000580798 FSCN2O14926 492 aa7.2□□□□□ -1.26
SMG8-205ENST00000580798 CDC27P30260 824 aa7.2□□□□□ -1.26
SMG8-205ENST00000580798 JAG1P78504 1218 aa7.2□□□□□ -1.26
SMG8-205ENST00000580798 COX20Q5RI15 118 aa7.2□□□□□ -1.26
SMG8-205ENST00000580798 OR13H1Q8NG92 308 aa7.2□□□□□ -1.26
SMG8-205ENST00000580798 FOXD4L4Q8WXT5 416 aaPredicted RBP7.2□□□□□ -1.26
SMG8-205ENST00000580798 DDX3YO15523 660 aaKnown RBP7.19□□□□□ -1.26
SMG8-205ENST00000580798 ADAM11O75078 769 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 HOXA10P31260 410 aaPredicted RBP7.19□□□□□ -1.26
SMG8-205ENST00000580798 BEND4Q6ZU67 534 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 PROSER2Q86WR7 435 aaPredicted RBP7.19□□□□□ -1.26
SMG8-205ENST00000580798 ETFBKMTQ8IXQ9 262 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 ABI1Q8IZP0 508 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 FNBP4Q8N3X1 1017 aaPredicted RBP7.19□□□□□ -1.26
SMG8-205ENST00000580798 KLHL23Q8NBE8 558 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 UBASH3BQ8TF42 649 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
SMG8-205ENST00000580798 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.19□□□□□ -1.26
SMG8-205ENST00000580798 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
SMG8-205ENST00000580798 BMP3P12645 472 aa7.18□□□□□ -1.26
SMG8-205ENST00000580798 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.18□□□□□ -1.26
SMG8-205ENST00000580798 PPP1R12CQ9BZL4 782 aa7.18□□□□□ -1.26
SMG8-205ENST00000580798 KCNF1Q9H3M0 494 aa7.18□□□□□ -1.26
SMG8-205ENST00000580798 WDR64B1ANS9 1081 aa7.17□□□□□ -1.26
SMG8-205ENST00000580798 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMG8-205ENST00000580798 EPHA1P21709 976 aa7.17□□□□□ -1.26
SMG8-205ENST00000580798 PREPP48147 710 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms