RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 MCM4P33991 863 aa24.5■■□□□ 1.51
SMG8-203ENST00000578922 RGL2O15211 777 aa24.5■■□□□ 1.51
SMG8-203ENST00000578922 HELBQ8NG08 1087 aaPredicted RBP24.5■■□□□ 1.51
SMG8-203ENST00000578922 FSD1Q9BTV5 496 aa24.5■■□□□ 1.51
SMG8-203ENST00000578922 AKAP2Q9Y2D5 859 aa24.5■■□□□ 1.51
SMG8-203ENST00000578922 MPHOSPH8Q99549 860 aa24.49■■□□□ 1.51
SMG8-203ENST00000578922 NPHP1O15259 732 aa24.49■■□□□ 1.51
SMG8-203ENST00000578922 GORABQ5T7V8 394 aa24.49■■□□□ 1.51
SMG8-203ENST00000578922 ATP2B3Q16720 1220 aa24.48■■□□□ 1.51
SMG8-203ENST00000578922 XAGE2Q96GT9 111 aa24.48■■□□□ 1.51
SMG8-203ENST00000578922 NYXQ9GZU5 481 aa24.48■■□□□ 1.51
SMG8-203ENST00000578922 UBR3Q6ZT12 1888 aa24.47■■□□□ 1.51
SMG8-203ENST00000578922 LAMB2P55268 1798 aa24.47■■□□□ 1.51
SMG8-203ENST00000578922 ADRA2BP18089 450 aa24.47■■□□□ 1.51
SMG8-203ENST00000578922 SGSM2O43147 1006 aa24.46■■□□□ 1.51
SMG8-203ENST00000578922 NFIXQ14938 502 aa24.46■■□□□ 1.51
SMG8-203ENST00000578922 TPTE2Q6XPS3 522 aa24.46■■□□□ 1.51
SMG8-203ENST00000578922 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
SMG8-203ENST00000578922 HAUS7Q99871 368 aa24.46■■□□□ 1.51
SMG8-203ENST00000578922 RTN4Q9NQC3 1192 aaKnown RBP24.46■■□□□ 1.51
SMG8-203ENST00000578922 IGHMBP2P38935 993 aaKnown RBP24.46■■□□□ 1.51
SMG8-203ENST00000578922 VGLL2Q8N8G2 317 aa24.46■■□□□ 1.51
SMG8-203ENST00000578922 FAM227BQ96M60 508 aa24.45■■□□□ 1.5
SMG8-203ENST00000578922 TAF5LO75529 589 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 PDE8BO95263 885 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 IFIT1P09914 478 aaKnown RBP24.44■■□□□ 1.5
SMG8-203ENST00000578922 TTC39AQ5SRH9 613 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 COL4A1P02462 1669 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 SNAP23O00161 211 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 GOLIM4O00461 696 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 PLSCR1O15162 318 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 SSFA2P28290 1259 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 NMIQ13287 307 aaPredicted RBP24.44■■□□□ 1.5
SMG8-203ENST00000578922 CCDC158Q5M9N0 1113 aa24.44■■□□□ 1.5
SMG8-203ENST00000578922 CIZ1Q9ULV3 898 aaPredicted RBP24.44■■□□□ 1.5
SMG8-203ENST00000578922 SPEF2Q9C093 1822 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 GYS1P13807 737 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 ZNF827Q17R98 1081 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 SNRKQ9NRH2 765 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 TFCP2L1Q9NZI6 479 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 MROH5Q6ZUA9 1318 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 RTL9Q8NET4 1388 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 CHGBP05060 677 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 DDIT3P35638 169 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 SF3B3Q15393 1217 aaKnown RBP24.43■■□□□ 1.5
SMG8-203ENST00000578922 SLC10A5Q5PT55 438 aa24.43■■□□□ 1.5
SMG8-203ENST00000578922 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 LRP5O75197 1615 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 RUFY2Q8WXA3 655 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 NLRP3Q96P20 1036 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 TAF1P21675 1872 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 SPRYD3Q8NCJ5 442 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 CDC5LQ99459 802 aaKnown RBP24.42■■□□□ 1.5
SMG8-203ENST00000578922 PAG1Q9NWQ8 432 aa24.42■■□□□ 1.5
SMG8-203ENST00000578922 CARMIL3Q8ND23 1372 aa24.41■■□□□ 1.5
SMG8-203ENST00000578922 A0A0D9SFI3 127 aa24.41■■□□□ 1.5
SMG8-203ENST00000578922 DDX11L8A8MPP1 907 aa24.41■■□□□ 1.5
SMG8-203ENST00000578922 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.5
SMG8-203ENST00000578922 KIAA1211Q6ZU35 1233 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 HIP1O00291 1037 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 SCARF1Q14162 830 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 PUM3Q15397 648 aaKnown RBP24.4■■□□□ 1.5
SMG8-203ENST00000578922 ANKRD18AQ8IVF6 992 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 FAM43AQ8N2R8 423 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 PALD1Q9ULE6 856 aa24.4■■□□□ 1.5
SMG8-203ENST00000578922 CNBD1Q8NA66 436 aa24.39■■□□□ 1.5
SMG8-203ENST00000578922 CELF1Q92879 486 aaKnown RBP24.39■■□□□ 1.5
SMG8-203ENST00000578922 LSG1Q9H089 658 aaKnown RBP24.39■■□□□ 1.5
SMG8-203ENST00000578922 CASZ1Q86V15 1759 aa24.39■■□□□ 1.49
SMG8-203ENST00000578922 CD2BP2O95400 341 aaKnown RBP24.39■■□□□ 1.49
SMG8-203ENST00000578922 PI16Q6UXB8 463 aa24.39■■□□□ 1.49
SMG8-203ENST00000578922 MCCP23508 829 aa24.38■■□□□ 1.49
SMG8-203ENST00000578922 CHRNDQ07001 517 aa24.38■■□□□ 1.49
SMG8-203ENST00000578922 LPIN2Q92539 896 aa24.37■■□□□ 1.49
SMG8-203ENST00000578922 PTH1RQ03431 593 aa24.37■■□□□ 1.49
SMG8-203ENST00000578922 SLFNL1Q499Z3 407 aa24.37■■□□□ 1.49
SMG8-203ENST00000578922 KBTBD3Q8NAB2 608 aa24.37■■□□□ 1.49
SMG8-203ENST00000578922 RAD50Q92878 1312 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 FGFR2P21802 821 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 AKT1S1Q96B36 256 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 FSD2A1L4K1 749 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 PHKA1P46020 1223 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 RABEP1Q15276 862 aa24.36■■□□□ 1.49
SMG8-203ENST00000578922 TRAK2O60296 914 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 SLC5A1P13866 664 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 ZAP70P43403 619 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 PRR5LQ6MZQ0 368 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 GOLGA6L3A6NEY3 463 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 CCDC102BQ68D86 513 aa24.35■■□□□ 1.49
SMG8-203ENST00000578922 ZNF589Q86UQ0 364 aaPredicted RBP24.35■■□□□ 1.49
SMG8-203ENST00000578922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.35■■□□□ 1.49
SMG8-203ENST00000578922 SEC62Q99442 399 aaKnown RBP24.35■■□□□ 1.49
SMG8-203ENST00000578922 SERPINB2P05120 415 aa24.34■■□□□ 1.49
SMG8-203ENST00000578922 PTMSP20962 102 aa24.34■■□□□ 1.49
SMG8-203ENST00000578922 MCAMP43121 646 aa24.34■■□□□ 1.49
SMG8-203ENST00000578922 COL23A1Q86Y22 540 aaPredicted RBP24.34■■□□□ 1.49
SMG8-203ENST00000578922 WTIPA6NIX2 430 aaPredicted RBP24.33■■□□□ 1.49
SMG8-203ENST00000578922 BSDC1Q9NW68 430 aaPredicted RBP24.33■■□□□ 1.49
SMG8-203ENST00000578922 ISY1Q9ULR0 285 aaKnown RBP24.33■■□□□ 1.49
SMG8-203ENST00000578922 TNS1Q9HBL0 1735 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms