RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	CDHR2	Q9BYE9	1310 aa		11.56	□□□□□ -0.56
NUP85-208	ENST00000578830	AOC2	O75106	756 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	RALBP1	Q15311	655 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	SLC10A5	Q5PT55	438 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	C3orf67	Q6ZVT6	689 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	SUPT20H	Q8NEM7	779 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	PGAP2	Q9UHJ9	254 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	PSME4	Q14997	1843 aa		11.55	□□□□□ -0.56
NUP85-208	ENST00000578830	CELF2	O95319	508 aa	Known RBP	11.54	□□□□□ -0.56
NUP85-208	ENST00000578830	CXCL9	Q07325	125 aa		11.54	□□□□□ -0.56
NUP85-208	ENST00000578830	ZC3H15	Q8WU90	426 aa	Known RBP	11.54	□□□□□ -0.56
NUP85-208	ENST00000578830	ABCC4	O15439	1325 aa		11.54	□□□□□ -0.56
NUP85-208	ENST00000578830	BBOX1	O75936	387 aa		11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	ECM2	O94769	699 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	GMPS	P49915	693 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	BRPF1	P55201	1214 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	CCDC184	Q52MB2	194 aa		11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	DPP8	Q6V1X1	898 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	UTP14A	Q9BVJ6	771 aa	Known RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	TSKS	Q9UJT2	592 aa		11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	DUOX1	Q9NRD9	1551 aa		11.53	□□□□□ -0.56
NUP85-208	ENST00000578830	SCN9A	Q15858	1988 aa		11.52	□□□□□ -0.56
NUP85-208	ENST00000578830	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	CCER2	I3L3R5	266 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	KIAA2012	Q0VF49	1180 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	TNIP1	Q15025	636 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	NFE2L2	Q16236	605 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	CIAPIN1	Q6FI81	312 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	LRP10	Q7Z4F1	713 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	SP8	Q8IXZ3	490 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	MPND	Q8N594	471 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	ZFP91	Q96JP5	570 aa	Predicted RBP	11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	PLEKHF1	Q96S99	279 aa		11.52	□□□□□ -0.57
NUP85-208	ENST00000578830	HIRA	P54198	1017 aa	Predicted RBP	11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	PDIA6	Q15084	440 aa		11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	CDC37L1	Q7L3B6	337 aa		11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	THUMPD2	Q9BTF0	503 aa	Known RBP	11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	BCL2L13	Q9BXK5	485 aa		11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	MCOLN1	Q9GZU1	580 aa		11.51	□□□□□ -0.57
NUP85-208	ENST00000578830	RAD17	O75943	681 aa		11.5	□□□□□ -0.57
NUP85-208	ENST00000578830	NOG	Q13253	232 aa		11.5	□□□□□ -0.57
NUP85-208	ENST00000578830	PNN	Q9H307	717 aa	Known RBP	11.5	□□□□□ -0.57
NUP85-208	ENST00000578830	CNOT7	Q9UIV1	285 aa	Known RBP	11.5	□□□□□ -0.57
NUP85-208	ENST00000578830		H7C1D1	291 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	HSP90AB3P	Q58FF7	597 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	DDX46	Q7L014	1031 aa	Known RBP	11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	EFCAB3	Q8N7B9	438 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	TRPM4	Q8TD43	1214 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	ZNF408	Q9H9D4	720 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	MRS2	Q9HD23	443 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	TSPYL4	Q9UJ04	414 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	MAPK8IP3	Q9UPT6	1336 aa		11.49	□□□□□ -0.57
NUP85-208	ENST00000578830	YDJC	A8MPS7	323 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	HCLS1	P14317	486 aa	Predicted RBP	11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	EIF2S2	P20042	333 aa	Known RBP	11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	DGKZ	Q13574	1117 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	GRAP	Q13588	217 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	PROSER3	Q2NL68	480 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	TMC4	Q7Z404	712 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	NLRP10	Q86W26	655 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	GRAPL	Q8TC17	118 aa	Predicted RBP	11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	CFAP44	Q96MT7	982 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	BABAM1	Q9NWV8	329 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	MYH3	P11055	1940 aa		11.48	□□□□□ -0.57
NUP85-208	ENST00000578830	SH3TC1	Q8TE82	1336 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	ANXA1	P04083	346 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	HUNK	P57058	714 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	USP48	Q86UV5	1035 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	MICALL2	Q8IY33	904 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	DPF2	Q92785	391 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	PCDH10	Q9P2E7	1040 aa		11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	TRMT112	Q9UI30	125 aa	Known RBP	11.47	□□□□□ -0.57
NUP85-208	ENST00000578830	SHTN1	A0MZ66	631 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	TCIRG1	Q13488	830 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	COPS6	Q7L5N1	327 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	SLAIN1	Q8ND83	568 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	XAGE3	Q8WTP9	111 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	ZIC5	Q96T25	663 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	SAGE1	Q9NXZ1	904 aa		11.46	□□□□□ -0.57
NUP85-208	ENST00000578830	PSMD14	O00487	310 aa		11.45	□□□□□ -0.58
NUP85-208	ENST00000578830	AIMP1	Q12904	312 aa	Known RBP	11.45	□□□□□ -0.58
NUP85-208	ENST00000578830	WASHC4	Q2M389	1173 aa		11.45	□□□□□ -0.58
NUP85-208	ENST00000578830	RGMB	Q6NW40	437 aa		11.45	□□□□□ -0.58
NUP85-208	ENST00000578830	COL4A1	P02462	1669 aa		11.45	□□□□□ -0.58
NUP85-208	ENST00000578830	SPEF2	Q9C093	1822 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	CENPF	P49454	3210 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	FAM155A	B1AL88	458 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	RPS12	P25398	132 aa	Known RBP	11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	RIPK4	P57078	832 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	SAMD7	Q7Z3H4	446 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	KRT26	Q7Z3Y9	468 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	C2orf69	Q8N8R5	385 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	CCDC102A	Q96A19	550 aa		11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	GBA2	Q9HCG7	927 aa	Predicted RBP	11.44	□□□□□ -0.58
NUP85-208	ENST00000578830	LMOD3	Q0VAK6	560 aa		11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	SF3B3	Q15393	1217 aa	Known RBP	11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.43	□□□□□ -0.58
NUP85-208	ENST00000578830	DLK2	Q6UY11	383 aa		11.43	□□□□□ -0.58

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