RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 TRIM17Q9Y577 477 aa15.9■□□□□ 0.14
SSH2-207ENST00000578411 ZNF609O15014 1411 aa15.9■□□□□ 0.14
SSH2-207ENST00000578411 BRCA2P51587 3418 aa15.9■□□□□ 0.14
SSH2-207ENST00000578411 PSME4Q14997 1843 aa15.89■□□□□ 0.13
SSH2-207ENST00000578411 KIAA0100Q14667 2235 aaKnown RBP15.89■□□□□ 0.13
SSH2-207ENST00000578411 MKRN3Q13064 507 aaKnown RBP15.89■□□□□ 0.13
SSH2-207ENST00000578411 SZT2Q5T011 3432 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 RIMBP2O15034 1052 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 HCLS1P14317 486 aaPredicted RBP15.88■□□□□ 0.13
SSH2-207ENST00000578411 OTOP1Q7RTM1 612 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 R3HDMLQ9H3Y0 253 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 KCNQ5Q9NR82 932 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
SSH2-207ENST00000578411 UBE2Q2LH0YL09 131 aa15.87■□□□□ 0.13
SSH2-207ENST00000578411 EN2P19622 333 aaPredicted RBP15.87■□□□□ 0.13
SSH2-207ENST00000578411 SCARF1Q14162 830 aa15.87■□□□□ 0.13
SSH2-207ENST00000578411 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
SSH2-207ENST00000578411 MIS18AQ9NYP9 233 aa15.87■□□□□ 0.13
SSH2-207ENST00000578411 CENPFP49454 3210 aa15.87■□□□□ 0.13
SSH2-207ENST00000578411 COL4A1P02462 1669 aa15.86■□□□□ 0.13
SSH2-207ENST00000578411 C6orf229H3BNL8 230 aa15.86■□□□□ 0.13
SSH2-207ENST00000578411 ZNF280AP59817 542 aaPredicted RBP15.86■□□□□ 0.13
SSH2-207ENST00000578411 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
SSH2-207ENST00000578411 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
SSH2-207ENST00000578411 SLC17A8Q8NDX2 589 aa15.86■□□□□ 0.13
SSH2-207ENST00000578411 EYA3Q99504 573 aa15.86■□□□□ 0.13
SSH2-207ENST00000578411 NSFL1CQ9UNZ2 370 aaKnown RBP15.86■□□□□ 0.13
SSH2-207ENST00000578411 ERBB4Q15303 1308 aa15.86■□□□□ 0.13
SSH2-207ENST00000578411 LAMB1P07942 1786 aa15.85■□□□□ 0.13
SSH2-207ENST00000578411 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
SSH2-207ENST00000578411 ARMC5Q96C12 935 aa15.85■□□□□ 0.13
SSH2-207ENST00000578411 TIMELESSQ9UNS1 1208 aa15.85■□□□□ 0.13
SSH2-207ENST00000578411 CEP290O15078 2479 aa15.85■□□□□ 0.13
SSH2-207ENST00000578411 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
SSH2-207ENST00000578411 ALDH1A1P00352 501 aa15.84■□□□□ 0.13
SSH2-207ENST00000578411 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
SSH2-207ENST00000578411 SCAF8Q9UPN6 1271 aaKnown RBP15.84■□□□□ 0.13
SSH2-207ENST00000578411 GPSM2P81274 684 aa15.83■□□□□ 0.12
SSH2-207ENST00000578411 TCIRG1Q13488 830 aa15.83■□□□□ 0.12
SSH2-207ENST00000578411 DLG5Q8TDM6 1919 aa15.83■□□□□ 0.12
SSH2-207ENST00000578411 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
SSH2-207ENST00000578411 H0YGN5 161 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 NF2P35240 595 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
SSH2-207ENST00000578411 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 AGBL3Q8NEM8 1001 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
SSH2-207ENST00000578411 OTUD5Q96G74 571 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 MYOZ2Q9NPC6 264 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 PTPN22Q9Y2R2 807 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
SSH2-207ENST00000578411 HSP90AB3PQ58FF7 597 aa15.81■□□□□ 0.12
SSH2-207ENST00000578411 PRAMEF18Q5VWM3 479 aa15.81■□□□□ 0.12
SSH2-207ENST00000578411 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
SSH2-207ENST00000578411 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
SSH2-207ENST00000578411 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
SSH2-207ENST00000578411 ERO1AQ96HE7 468 aa15.81■□□□□ 0.12
SSH2-207ENST00000578411 TRMT112Q9UI30 125 aaKnown RBP15.81■□□□□ 0.12
SSH2-207ENST00000578411 LRP10Q7Z4F1 713 aa15.8■□□□□ 0.12
SSH2-207ENST00000578411 TBC1D16Q8TBP0 767 aa15.8■□□□□ 0.12
SSH2-207ENST00000578411 NECTIN2Q92692 538 aa15.8■□□□□ 0.12
SSH2-207ENST00000578411 CFAP53Q96M91 514 aa15.8■□□□□ 0.12
SSH2-207ENST00000578411 THUMPD2Q9BTF0 503 aaKnown RBP15.8■□□□□ 0.12
SSH2-207ENST00000578411 TMEM106CQ9BVX2 250 aa15.8■□□□□ 0.12
SSH2-207ENST00000578411 G3V3G9 751 aa15.79■□□□□ 0.12
SSH2-207ENST00000578411 PER1O15534 1290 aaPredicted RBP15.79■□□□□ 0.12
SSH2-207ENST00000578411 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
SSH2-207ENST00000578411 U2AF1L5P0DN76 240 aaPredicted RBP15.79■□□□□ 0.12
SSH2-207ENST00000578411 U2AF1Q01081 240 aaKnown RBP eCLIP15.79■□□□□ 0.12
SSH2-207ENST00000578411 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
SSH2-207ENST00000578411 DCAF8Q5TAQ9 597 aa15.79■□□□□ 0.12
SSH2-207ENST00000578411 SPRYD7Q5W111 196 aa15.79■□□□□ 0.12
SSH2-207ENST00000578411 CD99L2Q8TCZ2 262 aa15.79■□□□□ 0.12
SSH2-207ENST00000578411 PTPN12Q05209 780 aaKnown RBP15.78■□□□□ 0.12
SSH2-207ENST00000578411 ARMC9Q7Z3E5 817 aa15.78■□□□□ 0.12
SSH2-207ENST00000578411 IFNL1Q8IU54 200 aa15.78■□□□□ 0.12
SSH2-207ENST00000578411 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
SSH2-207ENST00000578411 ZC3H12CQ9C0D7 883 aaKnown RBP15.78■□□□□ 0.12
SSH2-207ENST00000578411 NUDCQ9Y266 331 aa15.78■□□□□ 0.12
SSH2-207ENST00000578411 ZNF646O15015 1829 aaPredicted RBP15.78■□□□□ 0.12
SSH2-207ENST00000578411 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.12
SSH2-207ENST00000578411 UFL1O94874 794 aa15.77■□□□□ 0.12
SSH2-207ENST00000578411 POLA2Q14181 598 aa15.77■□□□□ 0.12
SSH2-207ENST00000578411 PROSER3Q2NL68 480 aa15.77■□□□□ 0.12
SSH2-207ENST00000578411 EFCC1Q9HA90 598 aa15.77■□□□□ 0.12
SSH2-207ENST00000578411 PDIA6Q15084 440 aa15.76■□□□□ 0.11
SSH2-207ENST00000578411 GMLQ99445 158 aa15.76■□□□□ 0.11
SSH2-207ENST00000578411 RBM27Q9P2N5 1060 aaKnown RBP15.76■□□□□ 0.11
SSH2-207ENST00000578411 IGF2BP3O00425 579 aaKnown RBP eCLIP15.75■□□□□ 0.11
SSH2-207ENST00000578411 ANXA1P04083 346 aa15.75■□□□□ 0.11
SSH2-207ENST00000578411 PRKG1Q13976 671 aa15.75■□□□□ 0.11
SSH2-207ENST00000578411 NBPF9Q3BBW0 867 aa15.75■□□□□ 0.11
SSH2-207ENST00000578411 RANBP2P49792 3224 aaKnown RBP15.75■□□□□ 0.11
SSH2-207ENST00000578411 INHBEP58166 350 aa15.74■□□□□ 0.11
SSH2-207ENST00000578411 SF3B3Q15393 1217 aaKnown RBP15.74■□□□□ 0.11
SSH2-207ENST00000578411 SLC4A8Q2Y0W8 1093 aa15.74■□□□□ 0.11
SSH2-207ENST00000578411 LDLRAD1Q5T700 205 aa15.74■□□□□ 0.11
SSH2-207ENST00000578411 ZNF428Q96B54 188 aa15.74■□□□□ 0.11
SSH2-207ENST00000578411 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
SSH2-207ENST00000578411 ANGEL1Q9UNK9 670 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms