RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 SLC52A2Q9HAB3 445 aa16.06■□□□□ 0.16
NDEL1-204ENST00000578172 TCHHQ07283 1943 aa16.05■□□□□ 0.16
NDEL1-204ENST00000578172 PTPDC1A2A3K4 754 aa16.05■□□□□ 0.16
NDEL1-204ENST00000578172 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-204ENST00000578172 METTL22Q9BUU2 404 aaPredicted RBP16.05■□□□□ 0.16
NDEL1-204ENST00000578172 TAF5LO75529 589 aa16.05■□□□□ 0.16
NDEL1-204ENST00000578172 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
NDEL1-204ENST00000578172 MCMDC2Q4G0Z9 681 aa16.05■□□□□ 0.16
NDEL1-204ENST00000578172 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
NDEL1-204ENST00000578172 SNAP23O00161 211 aa16.04■□□□□ 0.16
NDEL1-204ENST00000578172 SCAND2PQ9GZW5 306 aaPredicted RBP16.04■□□□□ 0.16
NDEL1-204ENST00000578172 PAG1Q9NWQ8 432 aa16.04■□□□□ 0.16
NDEL1-204ENST00000578172 NAA30Q147X3 362 aaPredicted RBP16.04■□□□□ 0.16
NDEL1-204ENST00000578172 FAM200AQ8TCP9 573 aa16.04■□□□□ 0.16
NDEL1-204ENST00000578172 MYL10Q9BUA6 226 aa16.04■□□□□ 0.16
NDEL1-204ENST00000578172 TOB2Q14106 344 aaPredicted RBP16.03■□□□□ 0.16
NDEL1-204ENST00000578172 MICU3Q86XE3 530 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 GOLGA8BA8MQT2 603 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 SYNE3Q6ZMZ3 975 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 ADORA1P30542 326 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 PTPN12Q05209 780 aaKnown RBP16.03■□□□□ 0.16
NDEL1-204ENST00000578172 NPHP3Q7Z494 1330 aa16.03■□□□□ 0.16
NDEL1-204ENST00000578172 A0A1B0GUL7 405 aa16.02■□□□□ 0.16
NDEL1-204ENST00000578172 ZNF500O60304 480 aaPredicted RBP16.02■□□□□ 0.16
NDEL1-204ENST00000578172 SCRN1Q12765 414 aa16.02■□□□□ 0.16
NDEL1-204ENST00000578172 METTL24Q5JXM2 366 aa16.02■□□□□ 0.16
NDEL1-204ENST00000578172 AOX1Q06278 1338 aa16.02■□□□□ 0.16
NDEL1-204ENST00000578172 KLF18A0A0U1RQI7 1052 aa16.02■□□□□ 0.15
NDEL1-204ENST00000578172 TNNT1P13805 278 aa16.02■□□□□ 0.15
NDEL1-204ENST00000578172 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
NDEL1-204ENST00000578172 PHKG2P15735 406 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 CCDC158Q5M9N0 1113 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 SPECC1Q5M775 1068 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 AOPEPQ8N6M6 819 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 USP28Q96RU2 1077 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 CWC25Q9NXE8 425 aaPredicted RBP16.01■□□□□ 0.15
NDEL1-204ENST00000578172 CYP27B1O15528 508 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 TRDNQ13061 729 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 CCAR2Q8N163 923 aaKnown RBP16.01■□□□□ 0.15
NDEL1-204ENST00000578172 MRVI1Q9Y6F6 885 aa16.01■□□□□ 0.15
NDEL1-204ENST00000578172 HOMER1Q86YM7 354 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
NDEL1-204ENST00000578172 SIPA1L2Q9P2F8 1722 aaPredicted RBP16■□□□□ 0.15
NDEL1-204ENST00000578172 TBC1D2BQ9UPU7 963 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 ZKSCAN3Q9BRR0 538 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 INCENPQ9NQS7 918 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 PEAK1Q9H792 1746 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 KRT32Q14532 448 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 NUP133Q8WUM0 1156 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 PGBD1Q96JS3 809 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 C8orf76Q96K31 380 aa16■□□□□ 0.15
NDEL1-204ENST00000578172 ORC3Q9UBD5 711 aaPredicted RBP16■□□□□ 0.15
NDEL1-204ENST00000578172 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 STOX1Q6ZVD7 989 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 AIFM3Q96NN9 605 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 HS1BP3Q53T59 392 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 CMTR1Q8N1G2 835 aaKnown RBP15.99■□□□□ 0.15
NDEL1-204ENST00000578172 PDILTQ8N807 584 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 CFAP45Q9UL16 551 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 PXDNQ92626 1479 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 SSH2Q76I76 1423 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 PDIA6Q15084 440 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 LDHAL6AQ6ZMR3 332 aa15.99■□□□□ 0.15
NDEL1-204ENST00000578172 ITSN1Q15811 1721 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 ERBB3P21860 1342 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 TNNT3P45378 269 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-204ENST00000578172 C11orf57Q6ZUT1 292 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-204ENST00000578172 SPATA31D1Q6ZQQ2 1576 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 U2AF2P26368 475 aaKnown RBP eCLIP15.98■□□□□ 0.152e-24■□□□□ 10.6
NDEL1-204ENST00000578172 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
NDEL1-204ENST00000578172 PDCL2Q8N4E4 241 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 HOXB7P09629 217 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 PHKBQ93100 1093 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 GTF3C6Q969F1 213 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 DENND2AQ9ULE3 1009 aa15.98■□□□□ 0.15
NDEL1-204ENST00000578172 UVSSAQ2YD98 709 aa15.97■□□□□ 0.15
NDEL1-204ENST00000578172 ZAP70P43403 619 aa15.97■□□□□ 0.15
NDEL1-204ENST00000578172 DHX32Q7L7V1 743 aaKnown RBP15.97■□□□□ 0.15
NDEL1-204ENST00000578172 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
NDEL1-204ENST00000578172 DDX19AQ9NUU7 478 aaKnown RBP15.96■□□□□ 0.15
NDEL1-204ENST00000578172 E7EWF7 191 aa15.96■□□□□ 0.15
NDEL1-204ENST00000578172 ABCF2Q9UG63 623 aa15.96■□□□□ 0.15
NDEL1-204ENST00000578172 TECPR2O15040 1411 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 DYNC1I1O14576 645 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 PRC1O43663 620 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 KBTBD3Q8NAB2 608 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 BABAM1Q9NWV8 329 aa15.96■□□□□ 0.14
NDEL1-204ENST00000578172 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
NDEL1-204ENST00000578172 IFIT5Q13325 482 aaKnown RBP15.95■□□□□ 0.14
NDEL1-204ENST00000578172 IMMTQ16891 758 aaKnown RBP15.95■□□□□ 0.14
NDEL1-204ENST00000578172 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
NDEL1-204ENST00000578172 CCDC112Q8NEF3 446 aa15.95■□□□□ 0.14
NDEL1-204ENST00000578172 HSPD1P10809 573 aaKnown RBP15.95■□□□□ 0.14
NDEL1-204ENST00000578172 MCM5P33992 734 aa15.95■□□□□ 0.14
NDEL1-204ENST00000578172 TMC6Q7Z403 805 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms