RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 TTLL6Q8N841 843 aa8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 CNKSR1Q969H4 720 aa8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 MASTLQ96GX5 879 aa8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 TMX4Q9H1E5 349 aaPredicted RBP8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 TNNQ9UQP3 1299 aa8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 CHMP3Q9Y3E7 222 aa8.43□□□□□ -1.06
PPP4R1-207ENST00000578010 GRM8O00222 908 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 SRGNP10124 158 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 KCNA3P22001 575 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 STYK1Q6J9G0 422 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 ARHGAP27Q6ZUM4 889 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 MICALL2Q8IY33 904 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 PANK1Q8TE04 598 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 HDAC5Q9UQL6 1122 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 ATP10DQ9P241 1426 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 ARFGEF1Q9Y6D6 1849 aa8.42□□□□□ -1.06
PPP4R1-207ENST00000578010 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 RNF123Q5XPI4 1314 aa8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 NBPF7P0C2Y1 421 aaPredicted RBP8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 YBX3P16989 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 SF3B3Q15393 1217 aaKnown RBP8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 CCDC152Q4G0S7 254 aa8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 INTS3Q68E01 1043 aaKnown RBP8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 ITPRIPQ8IWB1 547 aa8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 TMEM57Q8N5G2 664 aa8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 USP44Q9H0E7 712 aa8.41□□□□□ -1.06
PPP4R1-207ENST00000578010 KLRG2A4D1S0 409 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 C21orf2O43822 256 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 GRIN3BO60391 1043 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 BBOX1O75936 387 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 YY1P25490 414 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 TAF7LQ5H9L4 462 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 LMBR1LQ6UX01 489 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 CRAMP1Q96RY5 1269 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 SEC31BQ9NQW1 1179 aa8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
PPP4R1-207ENST00000578010 CACNA1FO60840 1977 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 ABCC12Q96J65 1359 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 SNPHO15079 494 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 GNAI3P08754 354 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 HOXA10P31260 410 aaPredicted RBP8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 CASP7P55210 303 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 CTSWP56202 376 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 RPS8P62241 208 aaKnown RBP8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 CCDC57Q2TAC2 916 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 CRY2Q49AN0 593 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 EPHA10Q5JZY3 1008 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 SUCLG2Q96I99 432 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 COG6Q9Y2V7 657 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 LAMB2P55268 1798 aa8.39□□□□□ -1.07
PPP4R1-207ENST00000578010 IBTKQ9P2D0 1353 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 SRCAPQ6ZRS2 3230 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 ANKRD18BA2A2Z9 1011 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 GNAI2P04899 355 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 CSF1RP07333 972 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 RLBP1P12271 317 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 IGHMBP2P38935 993 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 FOXO4P98177 505 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 GRAPQ13588 217 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 PDE3AQ14432 1141 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 ANKRD18AQ8IVF6 992 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 GRAPLQ8TC17 118 aaPredicted RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 CELF1Q92879 486 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 CDC5LQ99459 802 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 MPHOSPH8Q99549 860 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 MEIS3Q99687 375 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 PLA2G12BQ9BX93 195 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 BICC1Q9H694 974 aaKnown RBP8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 GREM2Q9H772 168 aa8.38□□□□□ -1.07
PPP4R1-207ENST00000578010 ABCC4O15439 1325 aa8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 ZBTB7BO15156 539 aaPredicted RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 ITGA6P23229 1130 aa8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 RRP1P56182 461 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 C20orf194Q5TEA3 1177 aa8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 SP8Q8IXZ3 490 aa8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 CHMP4BQ9H444 224 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 DDX60Q8IY21 1712 aaKnown RBP8.37□□□□□ -1.07
PPP4R1-207ENST00000578010 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 SLX4Q8IY92 1834 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 UTYO14607 1347 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 MVPQ14764 893 aaKnown RBP8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 CCDC93Q567U6 631 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 SOGA3Q5TF21 947 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 CC2D2BQ6DHV5 1058 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 OLFM4Q6UX06 510 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 RTKN2Q8IZC4 609 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 MPNDQ8N594 471 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 KAZALD1Q96I82 304 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 CNNM1Q9NRU3 951 aa8.36□□□□□ -1.07
PPP4R1-207ENST00000578010 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms