RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
NUP88-212ENST00000576708 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
NUP88-212ENST00000576708 TBC1D2BQ9UPU7 963 aa8.47□□□□□ -1.05
NUP88-212ENST00000576708 KDRP35968 1356 aa8.47□□□□□ -1.05
NUP88-212ENST00000576708 GRIN3BO60391 1043 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.06
NUP88-212ENST00000576708 MTHFSP49914 203 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 NFATC2IPQ8NCF5 419 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 GDPD2Q9HCC8 539 aa8.46□□□□□ -1.06
NUP88-212ENST00000576708 HSP90AB1P08238 724 aaKnown RBP8.45□□□□□ -1.06
NUP88-212ENST00000576708 MMP10P09238 476 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 HMOX1P09601 288 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 CC2D1BQ5T0F9 858 aaKnown RBP8.45□□□□□ -1.06
NUP88-212ENST00000576708 TRAPPC3LQ5T215 181 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
NUP88-212ENST00000576708 RTCBQ9Y3I0 505 aaKnown RBP8.45□□□□□ -1.06
NUP88-212ENST00000576708 SENP3-EIF4A1A0A087X0R7 540 aa8.44□□□□□ -1.06
NUP88-212ENST00000576708 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
NUP88-212ENST00000576708 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
NUP88-212ENST00000576708 LGR6Q9HBX8 967 aa8.44□□□□□ -1.06
NUP88-212ENST00000576708 SRP68Q9UHB9 627 aaKnown RBP8.44□□□□□ -1.06
NUP88-212ENST00000576708 GOLGB1Q14789 3259 aaKnown RBP8.43□□□□□ -1.06
NUP88-212ENST00000576708 A0A0G2JLW4 131 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 GIGYF1O75420 1035 aaPredicted RBP8.43□□□□□ -1.06
NUP88-212ENST00000576708 RPS6KA4O75676 772 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 GYS1P13807 737 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 ABL2P42684 1182 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 LINC01559Q495D7 138 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
NUP88-212ENST00000576708 ZNF526Q8TF50 670 aaPredicted RBP8.43□□□□□ -1.06
NUP88-212ENST00000576708 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
NUP88-212ENST00000576708 NDUFB9Q9Y6M9 179 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 CNTNAP4Q9C0A0 1308 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 ATP10DQ9P241 1426 aa8.43□□□□□ -1.06
NUP88-212ENST00000576708 APBB1O00213 710 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 RAD21O60216 631 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 RFC4P35249 363 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 CRKLP46109 303 aaKnown RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 SLC39A6Q13433 755 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 AKAP4Q5JQC9 854 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 INTS5Q6P9B9 1019 aaKnown RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 LIAT1Q6ZQX7 453 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 DNAJC10Q8IXB1 793 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 BAP1Q92560 729 aa8.42□□□□□ -1.06
NUP88-212ENST00000576708 CICQ96RK0 1608 aaPredicted RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 COL5A3P25940 1745 aaPredicted RBP8.42□□□□□ -1.06
NUP88-212ENST00000576708 TJP1Q07157 1748 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 RNMTO43148 476 aaKnown RBP8.41□□□□□ -1.06
NUP88-212ENST00000576708 DIAPH1O60610 1272 aaKnown RBP8.41□□□□□ -1.06
NUP88-212ENST00000576708 GPR37L1O60883 481 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 DPEP1P16444 411 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 NLGN1Q8N2Q7 840 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 FKBPLQ9UIM3 349 aa8.41□□□□□ -1.06
NUP88-212ENST00000576708 MYH14Q7Z406 1995 aaKnown RBP8.41□□□□□ -1.06
NUP88-212ENST00000576708 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 DDR1Q08345 913 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 SLC52A2Q9HAB3 445 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 PRM3Q9NNZ6 103 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 BCS1LQ9Y276 419 aa8.4□□□□□ -1.06
NUP88-212ENST00000576708 N4BP2Q86UW6 1770 aaPredicted RBP8.4□□□□□ -1.07
NUP88-212ENST00000576708 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.07
NUP88-212ENST00000576708 C10orf71Q711Q0 1435 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 ADCY9O60503 1353 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 USP42Q9H9J4 1324 aaKnown RBP8.39□□□□□ -1.07
NUP88-212ENST00000576708 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
NUP88-212ENST00000576708 ZMYND15Q9H091 742 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 PARP3Q9Y6F1 533 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 C4AP0C0L4 1744 aa8.39□□□□□ -1.07
NUP88-212ENST00000576708 CYP19A1P11511 503 aaPredicted RBP8.38□□□□□ -1.07
NUP88-212ENST00000576708 KCNA3P22001 575 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 SLC19A1P41440 591 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 TGFB2P61812 414 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 TRIM32Q13049 653 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 USPL1Q5W0Q7 1092 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 ARHGAP27Q6ZUM4 889 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 KCPQ6ZWJ8 1503 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 KIF13BQ9NQT8 1826 aa8.38□□□□□ -1.07
NUP88-212ENST00000576708 COL3A1P02461 1466 aaPredicted RBP8.38□□□□□ -1.07
NUP88-212ENST00000576708 SOS1Q07889 1333 aaPredicted RBP8.37□□□□□ -1.07
NUP88-212ENST00000576708 TM4SF1P30408 202 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 CHRNA5P30532 468 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 IRF5Q13568 498 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 PNMA1Q8ND90 353 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 IL17REQ8NFR9 667 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 FOXJ1Q92949 421 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 PRKD2Q9BZL6 878 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 ZBTB1Q9Y2K1 713 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 MRC1P22897 1456 aa8.37□□□□□ -1.07
NUP88-212ENST00000576708 ADAMTS7Q9UKP4 1686 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms