RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 TTF1Q15361 905 aaPredicted RBP9.94□□□□□ -0.82
NCBP3-205ENST00000575815 PUM3Q15397 648 aaKnown RBP9.94□□□□□ -0.82
NCBP3-205ENST00000575815 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
NCBP3-205ENST00000575815 MAGEB6Q8N7X4 407 aa9.94□□□□□ -0.82
NCBP3-205ENST00000575815 ARHGEF1Q92888 912 aaKnown RBP9.94□□□□□ -0.82
NCBP3-205ENST00000575815 COL5A2P05997 1499 aaPredicted RBP9.94□□□□□ -0.82
NCBP3-205ENST00000575815 RANBP6O60518 1105 aaKnown RBP9.94□□□□□ -0.82
NCBP3-205ENST00000575815 TRIM29Q14134 588 aa9.94□□□□□ -0.82
NCBP3-205ENST00000575815 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
NCBP3-205ENST00000575815 UFL1O94874 794 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 CCT2P78371 535 aaKnown RBP9.93□□□□□ -0.82
NCBP3-205ENST00000575815 PI16Q6UXB8 463 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 TTLL11Q8NHH1 800 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 SEC62Q99442 399 aaKnown RBP9.93□□□□□ -0.82
NCBP3-205ENST00000575815 RPS6KA4O75676 772 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 POLR3DP05423 398 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-205ENST00000575815 BCAMP50895 628 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 KRT32Q14532 448 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 BARGINQ6ZT62 677 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 UBAC1Q9BSL1 405 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 KDM6AO15550 1401 aaPredicted RBP9.93□□□□□ -0.82
NCBP3-205ENST00000575815 TXNRD1Q16881 649 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 USP26Q9BXU7 913 aa9.93□□□□□ -0.82
NCBP3-205ENST00000575815 ERVV-1B6SEH8 477 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 SLC3A2P08195 630 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 NECAB1Q8N987 351 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 ATP6V1DQ9Y5K8 247 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 OVOS2A0A0G2JMS6 1433 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 CAMTA1Q9Y6Y1 1673 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 SERPINB2P05120 415 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 PTMAP06454 111 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 DEKP35659 375 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 VPS53Q5VIR6 699 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 LARP1BQ659C4 914 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 TBC1D9BQ66K14 1250 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 CCDC144CPQ8IYA2 1237 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 LPIN2Q92539 896 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 RNF113AO15541 343 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 FIBPO43427 364 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 IKQ13123 557 aaPredicted RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 HIBADHP31937 336 aaKnown RBP9.92□□□□□ -0.82
NCBP3-205ENST00000575815 PHKA1P46020 1223 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 LINC00116Q8NCU8 138 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 RASSF8Q8NHQ8 419 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 MKNK2Q9HBH9 465 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 SLC4A4Q9Y6R1 1079 aa9.92□□□□□ -0.82
NCBP3-205ENST00000575815 EIF5P55010 431 aaKnown RBP9.91□□□□□ -0.82
NCBP3-205ENST00000575815 CHRNDQ07001 517 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 NEK1Q96PY6 1258 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 CCDC69A6NI79 296 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 PDE8BO95263 885 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 POLA2Q14181 598 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 BRF1Q92994 677 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 TRIM44Q96DX7 344 aaPredicted RBP9.91□□□□□ -0.82
NCBP3-205ENST00000575815 DDX11L8A8MPP1 907 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 PRPF40AO75400 957 aaKnown RBP9.91□□□□□ -0.82
NCBP3-205ENST00000575815 GUCY1B3Q02153 619 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 ANKRD1Q15327 319 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 KBTBD3Q8NAB2 608 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 ANTXR1Q9H6X2 564 aa9.91□□□□□ -0.82
NCBP3-205ENST00000575815 ADGRB2O60241 1585 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 ZFYP08048 801 aaPredicted RBP9.9□□□□□ -0.82
NCBP3-205ENST00000575815 CCDC102BQ68D86 513 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 RBM17Q96I25 401 aaKnown RBP9.9□□□□□ -0.82
NCBP3-205ENST00000575815 ISCA1Q9BUE6 129 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 SGSM2O43147 1006 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 MARCH6O60337 910 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 MMP10P09238 476 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 ATP5JP18859 108 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 NLGN1Q8N2Q7 840 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 ANKRD2Q9GZV1 360 aa9.9□□□□□ -0.82
NCBP3-205ENST00000575815 A0A0D9SFI3 127 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 IFIT3O14879 490 aaKnown RBP9.9□□□□□ -0.83
NCBP3-205ENST00000575815 MBD4O95243 580 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 BICD2Q8TD16 824 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 NARFQ9UHQ1 456 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 LIMCH1Q9UPQ0 1083 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 COL15A1P39059 1388 aa9.9□□□□□ -0.83
NCBP3-205ENST00000575815 CHD2O14647 1828 aaKnown RBP9.89□□□□□ -0.83
NCBP3-205ENST00000575815 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 TMX3Q96JJ7 454 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 H0YIN7 160 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 MPHOSPH10O00566 681 aaKnown RBP9.89□□□□□ -0.83
NCBP3-205ENST00000575815 PICALMQ13492 652 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 CCDC171Q6TFL3 1326 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 POLD1P28340 1107 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 ZNF804AQ7Z570 1209 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 MICU3Q86XE3 530 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 GPR101Q96P66 508 aaPredicted RBP9.89□□□□□ -0.83
NCBP3-205ENST00000575815 SLC4A9Q96Q91 983 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 GGA1Q9UJY5 639 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 ATF5Q9Y2D1 282 aaPredicted RBP9.89□□□□□ -0.83
NCBP3-205ENST00000575815 FMN2Q9NZ56 1722 aa9.89□□□□□ -0.83
NCBP3-205ENST00000575815 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
NCBP3-205ENST00000575815 NALCNQ8IZF0 1738 aa9.88□□□□□ -0.83
NCBP3-205ENST00000575815 XRN1Q8IZH2 1706 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms