RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 FTOQ9C0B1 505 aaKnown RBP eCLIP19.62■□□□□ 0.73
LITAF-209ENST00000571688 PI4KAP2A4QPH2 592 aa19.62■□□□□ 0.73
LITAF-209ENST00000571688 TMC6Q7Z403 805 aa19.62■□□□□ 0.73
LITAF-209ENST00000571688 PI4KAP1Q8N8J0 262 aa19.62■□□□□ 0.73
LITAF-209ENST00000571688 XPO4Q9C0E2 1151 aaKnown RBP19.62■□□□□ 0.73
LITAF-209ENST00000571688 TADA3O75528 432 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 PA2G4Q9UQ80 394 aaKnown RBP19.61■□□□□ 0.73
LITAF-209ENST00000571688 POLR3GO15318 223 aaPredicted RBP19.61■□□□□ 0.73
LITAF-209ENST00000571688 KRT32Q14532 448 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 USPL1Q5W0Q7 1092 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 NAA16Q6N069 864 aaPredicted RBP19.61■□□□□ 0.73
LITAF-209ENST00000571688 PLCD3Q8N3E9 789 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 BPIFA3Q9BQP9 254 aa19.61■□□□□ 0.73
LITAF-209ENST00000571688 SRRTQ9BXP5 876 aaKnown RBP19.61■□□□□ 0.73
LITAF-209ENST00000571688 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
LITAF-209ENST00000571688 ZNF589Q86UQ0 364 aaPredicted RBP19.6■□□□□ 0.73
LITAF-209ENST00000571688 USP28Q96RU2 1077 aa19.6■□□□□ 0.73
LITAF-209ENST00000571688 ATL3Q6DD88 541 aa19.6■□□□□ 0.73
LITAF-209ENST00000571688 FSIP1Q8NA03 581 aa19.6■□□□□ 0.73
LITAF-209ENST00000571688 IFNKQ9P0W0 207 aa19.6■□□□□ 0.73
LITAF-209ENST00000571688 ABCC6O95255 1503 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 NRDCO43847 1150 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 SMARCE1Q969G3 411 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 FSD1Q9BTV5 496 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 DNAI1Q9UI46 699 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 NUTM2FA1L443 756 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 CCP110O43303 1012 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 SMC2O95347 1197 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 ST5P78524 1137 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 CCDC158Q5M9N0 1113 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 GORABQ5T7V8 394 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 NUTM2GQ5VZR2 741 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 TRIM65Q6PJ69 517 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 ERCC4Q92889 916 aaPredicted RBP19.59■□□□□ 0.73
LITAF-209ENST00000571688 LLPHQ9BRT6 129 aaKnown RBP19.59■□□□□ 0.73
LITAF-209ENST00000571688 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
LITAF-209ENST00000571688 EFCAB8A8MWE9 144 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 TAF5LO75529 589 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 SEC31AO94979 1220 aaKnown RBP19.58■□□□□ 0.73
LITAF-209ENST00000571688 TPM1P09493 284 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 SCRN1Q12765 414 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 Q6ZUG5 572 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 HOMER1Q86YM7 354 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 NEK1Q96PY6 1258 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 CHPF2Q9P2E5 772 aa19.58■□□□□ 0.73
LITAF-209ENST00000571688 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.72
LITAF-209ENST00000571688 FMR1NBQ8N0W7 255 aaPredicted RBP19.58■□□□□ 0.72
LITAF-209ENST00000571688 MNS1Q8NEH6 495 aa19.58■□□□□ 0.72
LITAF-209ENST00000571688 EAF2Q96CJ1 260 aaPredicted RBP19.58■□□□□ 0.72
LITAF-209ENST00000571688 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.58■□□□□ 0.72
LITAF-209ENST00000571688 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.58■□□□□ 0.72
LITAF-209ENST00000571688 ALDH1L1O75891 902 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 SASH1O94885 1247 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 TBC1D8O95759 1140 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 KRBA2Q6ZNG9 492 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 ZNF396Q96N95 335 aaPredicted RBP19.57■□□□□ 0.72
LITAF-209ENST00000571688 SASH3O75995 380 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 HSP90B1P14625 803 aaKnown RBP19.57■□□□□ 0.72
LITAF-209ENST00000571688 FBXW7Q969H0 707 aa19.57■□□□□ 0.72
LITAF-209ENST00000571688 FANCGO15287 622 aa19.56■□□□□ 0.72
LITAF-209ENST00000571688 OAS2P29728 719 aaKnown RBP19.56■□□□□ 0.72
LITAF-209ENST00000571688 AMPHP49418 695 aa19.56■□□□□ 0.72
LITAF-209ENST00000571688 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
LITAF-209ENST00000571688 HOXB7P09629 217 aa19.56■□□□□ 0.72
LITAF-209ENST00000571688 LRRFIP1Q32MZ4 808 aaKnown RBP19.56■□□□□ 0.72
LITAF-209ENST00000571688 NSUN7Q8NE18 718 aaKnown RBP19.56■□□□□ 0.72
LITAF-209ENST00000571688 BOLA2Q9H3K6 86 aa19.56■□□□□ 0.72
LITAF-209ENST00000571688 ME1P48163 572 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 GPS2Q13227 327 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 MRPS27Q92552 414 aaKnown RBP19.55■□□□□ 0.72
LITAF-209ENST00000571688 CCDC8Q9H0W5 538 aaPredicted RBP19.55■□□□□ 0.72
LITAF-209ENST00000571688 TLR7Q9NYK1 1049 aaKnown RBP19.55■□□□□ 0.72
LITAF-209ENST00000571688 KIAA1468Q9P260 1216 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 PARP3Q9Y6F1 533 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 KDM3BQ7LBC6 1761 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 COL15A1P39059 1388 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 ROBO2Q9HCK4 1378 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 PFKFB2O60825 505 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 CC2D1AQ6P1N0 951 aaPredicted RBP19.55■□□□□ 0.72
LITAF-209ENST00000571688 CARD6Q9BX69 1037 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 PTPRUQ92729 1446 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 NEDD4P46934 1319 aa19.55■□□□□ 0.72
LITAF-209ENST00000571688 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
LITAF-209ENST00000571688 LAMA4Q16363 1823 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 MED1Q15648 1581 aaPredicted RBP19.54■□□□□ 0.72
LITAF-209ENST00000571688 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
LITAF-209ENST00000571688 PSME1Q06323 249 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 CTDNEP1O95476 244 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 EVCP57679 992 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 SMC1AQ14683 1233 aaKnown RBP19.54■□□□□ 0.72
LITAF-209ENST00000571688 NCAPHQ15003 741 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 ZSCAN26Q16670 478 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 SDF4Q9BRK5 362 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 RASSF4Q9H2L5 321 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 ZCCHC17Q9NP64 241 aaKnown RBP19.54■□□□□ 0.72
LITAF-209ENST00000571688 PCDHA7Q9UN72 937 aa19.54■□□□□ 0.72
LITAF-209ENST00000571688 ILDR1Q86SU0 546 aaPredicted RBP19.53■□□□□ 0.72
LITAF-209ENST00000571688 REXO1L1PQ8IX06 675 aa19.53■□□□□ 0.72
LITAF-209ENST00000571688 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms