RNA–Protein interactions for RNA: ENST00000570827.6

USP43-203, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 2

Gene USP43, Length 3,624 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-203ENST00000570827 TULP1O00294 542 aaPredicted RBP11.59□□□□□ -0.55
USP43-203ENST00000570827 SLC3A2P08195 630 aaKnown RBP11.59□□□□□ -0.55
USP43-203ENST00000570827 HSPA2P54652 639 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 GOLGA8FQ08AF8 430 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 GOLGA8DPQ0D2H9 430 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
USP43-203ENST00000570827 CD163L1Q9NR16 1453 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 KIAA0232Q92628 1395 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 KRT32Q14532 448 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 BMS1Q14692 1282 aaKnown RBP11.59□□□□□ -0.55
USP43-203ENST00000570827 OLFM4Q6UX06 510 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 PTPDC1A2A3K4 754 aa11.59□□□□□ -0.55
USP43-203ENST00000570827 ZNF589Q86UQ0 364 aaPredicted RBP11.59□□□□□ -0.55
USP43-203ENST00000570827 GNG11P61952 73 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 PLEKHO1Q53GL0 409 aaPredicted RBP11.58□□□□□ -0.56
USP43-203ENST00000570827 FBXO38Q6PIJ6 1188 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 C8orf76Q96K31 380 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 USP28Q96RU2 1077 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
USP43-203ENST00000570827 RNF216Q9NWF9 866 aaPredicted RBP11.58□□□□□ -0.56
USP43-203ENST00000570827 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
USP43-203ENST00000570827 PDE4CQ08493 712 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 COL9A3Q14050 684 aaPredicted RBP11.58□□□□□ -0.56
USP43-203ENST00000570827 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 TMEM87AQ8NBN3 555 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 PGBD1Q96JS3 809 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 TTC41PQ6P2S7 1318 aa11.58□□□□□ -0.56
USP43-203ENST00000570827 RXRAP19793 462 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 KLHL10Q6JEL2 608 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 CALCOCO1Q9P1Z2 691 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 CTNNA3Q9UI47 895 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 ARHGEF40Q8TER5 1519 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 GRM8O00222 908 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
USP43-203ENST00000570827 LMAN1P49257 510 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 TRIM29Q14134 588 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 NEK11Q8NG66 645 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 CARD6Q9BX69 1037 aa11.57□□□□□ -0.56
USP43-203ENST00000570827 XPO4Q9C0E2 1151 aaKnown RBP11.57□□□□□ -0.56
USP43-203ENST00000570827 NEMFO60524 1076 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 EVA1CP58658 441 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 TRDNQ13061 729 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 RRP12Q5JTH9 1297 aaKnown RBP11.56□□□□□ -0.56
USP43-203ENST00000570827 TAF3Q5VWG9 929 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 ERO1AQ96HE7 468 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 CTAGE5O15320 804 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 MCM6Q14566 821 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 KARSQ15046 597 aaKnown RBP11.56□□□□□ -0.56
USP43-203ENST00000570827 MRPS27Q92552 414 aaKnown RBP11.56□□□□□ -0.56
USP43-203ENST00000570827 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 EPC1Q9H2F5 836 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 GPTP24298 496 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 UBASH3AP57075 661 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 XAGE3Q8WTP9 111 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 ORC3Q9UBD5 711 aaPredicted RBP11.56□□□□□ -0.56
USP43-203ENST00000570827 MTMR7Q9Y216 660 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 DIP2BQ9P265 1576 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
USP43-203ENST00000570827 PHACTR2O75167 634 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 GSDMDP57764 484 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 ANKLE2Q86XL3 938 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 GOLGA6L1Q8N7Z2 621 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 ZSCAN16Q9H4T2 348 aaPredicted RBP11.55□□□□□ -0.56
USP43-203ENST00000570827 GOLGA8BA8MQT2 603 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 SEC31AO94979 1220 aaKnown RBP11.55□□□□□ -0.56
USP43-203ENST00000570827 ATF3P18847 181 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 TFCP2Q12800 502 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 TOM1L2Q6ZVM7 507 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 GABPB1Q06547 395 aaPredicted RBP11.55□□□□□ -0.56
USP43-203ENST00000570827 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 DBNDD2Q9BQY9 259 aa11.55□□□□□ -0.56
USP43-203ENST00000570827 A0A087WZG4 1122 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 GCP02774 474 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 TIMM10P62072 90 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 NECTIN1Q15223 517 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 BEND3Q5T5X7 828 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
USP43-203ENST00000570827 C10orf67Q8IYJ2 551 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
USP43-203ENST00000570827 SPECC1Q5M775 1068 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 TDRD7Q8NHU6 1098 aaKnown RBP11.54□□□□□ -0.56
USP43-203ENST00000570827 GJB4Q9NTQ9 266 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 DDX41Q9UJV9 622 aaKnown RBP11.54□□□□□ -0.56
USP43-203ENST00000570827 KSR2Q6VAB6 950 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.54□□□□□ -0.56
USP43-203ENST00000570827 FLT4P35916 1363 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 TMEM2Q9UHN6 1383 aa11.54□□□□□ -0.56
USP43-203ENST00000570827 AOX1Q06278 1338 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
USP43-203ENST00000570827 CASQ1P31415 396 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 FAM193AP78312 1265 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 FAM160A1Q05DH4 1040 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 RASSF8Q8NHQ8 419 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 MAP4K1Q92918 833 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
USP43-203ENST00000570827 PUF60Q9UHX1 559 aaKnown RBP11.53□□□□□ -0.56
USP43-203ENST00000570827 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms