RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RFX1P22670 979 aa10.23□□□□□ -0.77
CHD9-220ENST00000569794 TRIP4Q15650 581 aaPredicted RBP10.23□□□□□ -0.77
CHD9-220ENST00000569794 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
CHD9-220ENST00000569794 LCE3BQ5TA77 95 aa10.23□□□□□ -0.77
CHD9-220ENST00000569794 PRIMPOLQ96LW4 560 aa10.23□□□□□ -0.77
CHD9-220ENST00000569794 NOVA2Q9UNW9 492 aaKnown RBP10.23□□□□□ -0.77
CHD9-220ENST00000569794 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
CHD9-220ENST00000569794 SWI5Q1ZZU3 235 aa10.21□□□□□ -0.77
CHD9-220ENST00000569794 CACTIN-AS1Q8N1I8 211 aa10.21□□□□□ -0.77
CHD9-220ENST00000569794 SAP130Q9H0E3 1048 aa10.21□□□□□ -0.77
CHD9-220ENST00000569794 MUC3BQ9H195 1237 aa10.21□□□□□ -0.77
CHD9-220ENST00000569794 ACIN1Q9UKV3 1341 aaKnown RBP10.21□□□□□ -0.78
CHD9-220ENST00000569794 PRMT3O60678 531 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 OCLNQ16625 522 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 TMEM132AQ24JP5 1023 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 FAM26DQ5JW98 314 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 AGGF1Q8N302 714 aaeCLIP10.2□□□□□ -0.78
CHD9-220ENST00000569794 PCMTD2Q9NV79 361 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 PPME1Q9Y570 386 aa10.2□□□□□ -0.78
CHD9-220ENST00000569794 GLB1P16278 677 aa10.19□□□□□ -0.78
CHD9-220ENST00000569794 BRD2P25440 801 aaKnown RBP10.19□□□□□ -0.78
CHD9-220ENST00000569794 C16orf46Q6P387 395 aa10.19□□□□□ -0.78
CHD9-220ENST00000569794 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.19□□□□□ -0.78
CHD9-220ENST00000569794 OR13H1Q8NG92 308 aa10.19□□□□□ -0.78
CHD9-220ENST00000569794 UBAP1LF5GYI3 381 aa10.17□□□□□ -0.78
CHD9-220ENST00000569794 SSTR4P31391 388 aa10.17□□□□□ -0.78
CHD9-220ENST00000569794 CD97P48960 835 aa10.17□□□□□ -0.78
CHD9-220ENST00000569794 COL13A1Q5TAT6 717 aaPredicted RBP10.17□□□□□ -0.78
CHD9-220ENST00000569794 GALNT11Q8NCW6 608 aa10.17□□□□□ -0.78
CHD9-220ENST00000569794 COL26A1Q96A83 441 aa10.17□□□□□ -0.78
CHD9-220ENST00000569794 TNFRSF10BO14763 440 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 FAM69CQ0P6D2 419 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 MCTP1Q6DN14 999 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 PIK3R5Q8WYR1 880 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 UBL7Q96S82 380 aaPredicted RBP10.16□□□□□ -0.78
CHD9-220ENST00000569794 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
CHD9-220ENST00000569794 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 RAXQ9Y2V3 346 aa10.16□□□□□ -0.78
CHD9-220ENST00000569794 LINC01387J3KSC0 135 aa10.15□□□□□ -0.78
CHD9-220ENST00000569794 ATP11AP98196 1134 aa10.15□□□□□ -0.78
CHD9-220ENST00000569794 HYAL2Q12891 473 aa10.15□□□□□ -0.78
CHD9-220ENST00000569794 GSC2O15499 205 aa10.14□□□□□ -0.79
CHD9-220ENST00000569794 WISP1O95388 367 aa10.14□□□□□ -0.79
CHD9-220ENST00000569794 ELOAQ14241 798 aaKnown RBP10.14□□□□□ -0.79
CHD9-220ENST00000569794 CAPN12Q6ZSI9 719 aa10.14□□□□□ -0.79
CHD9-220ENST00000569794 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
CHD9-220ENST00000569794 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
CHD9-220ENST00000569794 TM4SF5O14894 197 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 PTCD1O75127 700 aaKnown RBP10.13□□□□□ -0.79
CHD9-220ENST00000569794 IGLV1-40P01703 118 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 CD68P34810 354 aaPredicted RBP10.13□□□□□ -0.79
CHD9-220ENST00000569794 CEP135Q66GS9 1140 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 STK32AQ8WU08 396 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 LACRTQ9GZZ8 138 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 STOML1Q9UBI4 398 aa10.13□□□□□ -0.79
CHD9-220ENST00000569794 TXNDC11Q6PKC3 985 aa10.12□□□□□ -0.79
CHD9-220ENST00000569794 ARMC10Q8N2F6 343 aa10.12□□□□□ -0.79
CHD9-220ENST00000569794 SPACA7Q96KW9 195 aa10.12□□□□□ -0.79
CHD9-220ENST00000569794 KCNK4Q9NYG8 393 aa10.12□□□□□ -0.79
CHD9-220ENST00000569794 COL17A1Q9UMD9 1497 aaPredicted RBP10.11□□□□□ -0.79
CHD9-220ENST00000569794 DHX15O43143 795 aaKnown RBP10.11□□□□□ -0.79
CHD9-220ENST00000569794 SMNDC1O75940 238 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHD9-220ENST00000569794 CDC27P30260 824 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 ZAP70P43403 619 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 TTC39BQ5VTQ0 682 aaPredicted RBP10.11□□□□□ -0.79
CHD9-220ENST00000569794 ADAMTSL4Q6UY14 1074 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 ACAD11Q709F0 780 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 MKNK1Q9BUB5 465 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 CEP41Q9BYV8 373 aa10.11□□□□□ -0.79
CHD9-220ENST00000569794 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
CHD9-220ENST00000569794 FNDC3AQ9Y2H6 1198 aaKnown RBP10.11□□□□□ -0.79
CHD9-220ENST00000569794 KIAA1324LA8MWY0 1029 aaPredicted RBP10.1□□□□□ -0.79
CHD9-220ENST00000569794 KIF4AO95239 1232 aa10.1□□□□□ -0.79
CHD9-220ENST00000569794 MED26O95402 600 aa10.1□□□□□ -0.79
CHD9-220ENST00000569794 SCNN1AP37088 669 aa10.1□□□□□ -0.79
CHD9-220ENST00000569794 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
CHD9-220ENST00000569794 RASSF4Q9H2L5 321 aa10.1□□□□□ -0.79
CHD9-220ENST00000569794 GOLGA2P5Q9HBQ8 144 aa10.1□□□□□ -0.79
CHD9-220ENST00000569794 TGFB1P01137 390 aa10.09□□□□□ -0.79
CHD9-220ENST00000569794 CARD10Q9BWT7 1032 aa10.09□□□□□ -0.79
CHD9-220ENST00000569794 COBLO75128 1261 aa10.08□□□□□ -0.8
CHD9-220ENST00000569794 CDC25BP30305 580 aa10.08□□□□□ -0.8
CHD9-220ENST00000569794 UVSSAQ2YD98 709 aa10.08□□□□□ -0.8
CHD9-220ENST00000569794 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
CHD9-220ENST00000569794 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
CHD9-220ENST00000569794 FSCN2O14926 492 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 ZBTB39O15060 712 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 ZDHHC13Q8IUH4 622 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 KLHL23Q8NBE8 558 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
CHD9-220ENST00000569794 PBX4Q9BYU1 374 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 ABI2Q9NYB9 513 aaPredicted RBP10.07□□□□□ -0.8
CHD9-220ENST00000569794 STIM2Q9P246 746 aa10.07□□□□□ -0.8
CHD9-220ENST00000569794 CYP2E1P05181 493 aaPredicted RBP10.06□□□□□ -0.8
CHD9-220ENST00000569794 EPHA1P21709 976 aa10.06□□□□□ -0.8
CHD9-220ENST00000569794 NFIAQ12857 509 aa10.06□□□□□ -0.8
CHD9-220ENST00000569794 CEP120Q8N960 986 aa10.06□□□□□ -0.8
CHD9-220ENST00000569794 UTP4Q969X6 686 aaKnown RBP10.06□□□□□ -0.8
CHD9-220ENST00000569794 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
CHD9-220ENST00000569794 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms